RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 GALNT17Q6IS24 598 aa18.25■□□□□ 0.51
ERGIC3-216ENST00000488384 CYFIP1Q7L576 1253 aa18.25■□□□□ 0.51
ERGIC3-216ENST00000488384 FAM126BQ8IXS8 530 aa18.25■□□□□ 0.51
ERGIC3-216ENST00000488384 KAT2BQ92831 832 aa18.25■□□□□ 0.51
ERGIC3-216ENST00000488384 TOX2Q96NM4 488 aa18.25■□□□□ 0.51
ERGIC3-216ENST00000488384 KCNH7Q9NS40 1196 aa18.25■□□□□ 0.51
ERGIC3-216ENST00000488384 PKD2L1Q9P0L9 805 aa18.25■□□□□ 0.51
ERGIC3-216ENST00000488384 TELO2Q9Y4R8 837 aa18.25■□□□□ 0.51
ERGIC3-216ENST00000488384 IGLV3-22A0A075B6J6 115 aa18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 MEIS1O00470 390 aa18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 SOX1O00570 391 aaPredicted RBP18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 EDIL3O43854 480 aa18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 F2P00734 622 aa18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 CLTBP09497 229 aa18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 XBP1P17861 261 aa18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 FAAP100Q0VG06 881 aa18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 SH3RF1Q7Z6J0 888 aa18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 IL27Q8NEV9 243 aa18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 LLPHQ9BRT6 129 aaKnown RBP18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 PRDM5Q9NQX1 630 aaPredicted RBP18.24■□□□□ 0.51
ERGIC3-216ENST00000488384 TRIM43BA6NCK2 446 aa18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 MAFGO15525 162 aa18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 ARP10275 920 aa18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 NBPF20Q3BBV1 942 aa18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 NIPA1Q7RTP0 329 aa18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 GIMAP8Q8ND71 665 aaPredicted RBP18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 PPP1R13LQ8WUF5 828 aa18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 TRIM43Q96BQ3 446 aaPredicted RBP18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 GPR20Q99678 358 aa18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 SEZ6LQ9BYH1 1024 aa18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 AGO4Q9HCK5 861 aaKnown RBP18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 TBX21Q9UL17 535 aa18.23■□□□□ 0.51
ERGIC3-216ENST00000488384 DCDC2CA8MYV0 355 aa18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 NOP56O00567 594 aaKnown RBP18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 PPFIA4O75335 1185 aa18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 CD4P01730 458 aa18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 CIITAP33076 1130 aa18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 ZNF76P36508 570 aa18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 SP4Q02446 784 aa18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 ITGB3BPQ13352 177 aaPredicted RBP18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 PLA2G4DQ86XP0 818 aa18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 OXER1Q8TDS5 423 aa18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 TBCKQ8TEA7 893 aa18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 LENG9Q96B70 501 aa18.22■□□□□ 0.51
ERGIC3-216ENST00000488384 KIAA0355O15063 1070 aa18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 B4GALT4O60513 344 aa18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 LGALS2P05162 132 aa18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 MAGEA10P43363 369 aaPredicted RBP18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 FOSBP53539 338 aa18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 SETQ01105 290 aaPredicted RBP18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 NFRKBQ6P4R8 1299 aa18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 KRT25Q7Z3Z0 450 aa18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 C16orf70Q9BSU1 422 aa18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 TRPV6Q9H1D0 765 aa18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 PRKAG2Q9UGJ0 569 aa18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 NFASCO94856 1347 aa18.21■□□□□ 0.51
ERGIC3-216ENST00000488384 A0A1W2PPC1 479 aa18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 HAS3O00219 553 aa18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 TLR3O15455 904 aaKnown RBP18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 ITGB8P26012 769 aa18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 BMP8BP34820 402 aa18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 PSEN2P49810 448 aa18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 MFSD10Q14728 455 aa18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 NONOQ15233 471 aaKnown RBP eCLIP18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 TRIM50Q86XT4 487 aa18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 TMX3Q96JJ7 454 aa18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 KATNAL1Q9BW62 490 aa18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 JPH1Q9HDC5 661 aaPredicted RBP18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 TRMT13Q9NUP7 481 aaKnown RBP18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 TMEM39AQ9NV64 488 aa18.2■□□□□ 0.5
ERGIC3-216ENST00000488384 MMP1P03956 469 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 KRT2P35908 639 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 MCM2P49736 904 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 USP11P51784 963 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 CHMP4BP1P59074 171 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 HMGN5P82970 282 aaKnown RBP18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 PTPN11Q06124 597 aaPredicted RBP18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 NR5A1Q13285 461 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 KIAA0753Q2KHM9 967 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 PRR16Q569H4 304 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 FAM47CQ5HY64 1035 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 KRT40Q6A162 431 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 SESTD1Q86VW0 696 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 TNFRSF25Q93038 417 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 SDF4Q9BRK5 362 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 SLC9A2Q9UBY0 812 aa18.19■□□□□ 0.5
ERGIC3-216ENST00000488384 CCDC194A0A1B0GVG4 234 aa18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 GSTTP1A0A1W2PQM5 241 aa18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 FAM205CA6NFA0 338 aa18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 TDP2O95551 362 aa18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 TCF7P36402 384 aaPredicted RBP18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 MDM2Q00987 491 aaPredicted RBP18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 INF2Q27J81 1249 aa18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 EARS2Q5JPH6 523 aaKnown RBP18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 LRCH3Q96II8 777 aa18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 UIMC1Q96RL1 719 aa18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 BRMS1Q9HCU9 246 aa18.18■□□□□ 0.5
ERGIC3-216ENST00000488384 H3BRB1 525 aa18.17■□□□□ 0.5
ERGIC3-216ENST00000488384 IPO5O00410 1097 aaKnown RBP18.17■□□□□ 0.5
ERGIC3-216ENST00000488384 DHX15O43143 795 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms