RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 ZSWIM3Q96MP5 696 aa7.15□□□□□ -1.26
VPS8-224ENST00000488255 SPATA25Q9BR10 227 aa7.15□□□□□ -1.26
VPS8-224ENST00000488255 C11orf84Q9BUA3 381 aaPredicted RBP7.15□□□□□ -1.26
VPS8-224ENST00000488255 CD244Q9BZW8 370 aa7.15□□□□□ -1.26
VPS8-224ENST00000488255 SLC52A2Q9HAB3 445 aa7.15□□□□□ -1.26
VPS8-224ENST00000488255 RBPJLQ9UBG7 517 aa7.15□□□□□ -1.26
VPS8-224ENST00000488255 DSEQ9UL01 958 aa7.15□□□□□ -1.26
VPS8-224ENST00000488255 SASH1O94885 1247 aa7.14□□□□□ -1.27
VPS8-224ENST00000488255 PYGMP11217 842 aa7.14□□□□□ -1.27
VPS8-224ENST00000488255 KRT15P19012 456 aa7.14□□□□□ -1.27
VPS8-224ENST00000488255 DNM2P50570 870 aa7.14□□□□□ -1.27
VPS8-224ENST00000488255 ST5P78524 1137 aa7.14□□□□□ -1.27
VPS8-224ENST00000488255 TEPPQ6URK8 271 aa7.14□□□□□ -1.27
VPS8-224ENST00000488255 TMC5Q6UXY8 1006 aa7.14□□□□□ -1.27
VPS8-224ENST00000488255 SAPCD2Q86UD0 394 aa7.14□□□□□ -1.27
VPS8-224ENST00000488255 ZC3H7AQ8IWR0 971 aaKnown RBP7.14□□□□□ -1.27
VPS8-224ENST00000488255 TRIM48Q8IWZ4 208 aa7.14□□□□□ -1.27
VPS8-224ENST00000488255 PARD6AQ9NPB6 346 aa7.14□□□□□ -1.27
VPS8-224ENST00000488255 SPATA6Q9NWH7 488 aaPredicted RBP7.14□□□□□ -1.27
VPS8-224ENST00000488255 RASGRP1O95267 797 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 LRG1P02750 347 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 SLURP1P55000 103 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 ITGA1P56199 1179 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 ZC3H12BQ5HYM0 836 aaKnown RBP7.13□□□□□ -1.27
VPS8-224ENST00000488255 LIPIQ6XZB0 460 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 TTLL7Q6ZT98 887 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 EP400NLQ6ZTU2 488 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 PCDH19Q8TAB3 1148 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 SLC7A14Q8TBB6 771 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 FBXW5Q969U6 566 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 PIF1Q9H611 641 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 KANSL2Q9H9L4 492 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 SFMBT1Q9UHJ3 866 aa7.13□□□□□ -1.27
VPS8-224ENST00000488255 KCNK3O14649 394 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 APPP05067 770 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 KCNC1P48547 511 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 DLX2Q07687 328 aaPredicted RBP7.12□□□□□ -1.27
VPS8-224ENST00000488255 PHF19Q5T6S3 580 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 ARHGAP36Q6ZRI8 547 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 OSTM1Q86WC4 334 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 KYQ8NBH2 561 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 UHMK1Q8TAS1 419 aaKnown RBP7.12□□□□□ -1.27
VPS8-224ENST00000488255 SH3TC2Q8TF17 1288 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 MAGEB10Q96LZ2 347 aaPredicted RBP7.12□□□□□ -1.27
VPS8-224ENST00000488255 KCNC2Q96PR1 638 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 NGRNQ9NPE2 291 aaKnown RBP7.12□□□□□ -1.27
VPS8-224ENST00000488255 NTMQ9P121 344 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 USP35Q9P2H5 1018 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 CROTQ9UKG9 612 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 TELO2Q9Y4R8 837 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 NUB1Q9Y5A7 615 aa7.12□□□□□ -1.27
VPS8-224ENST00000488255 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.11□□□□□ -1.27
VPS8-224ENST00000488255 TCRBV5S4A2TA0A5A2 114 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 CCDC66A2RUB6 948 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 OTOL1A6NHN0 477 aaPredicted RBP7.11□□□□□ -1.27
VPS8-224ENST00000488255 ARVCFO00192 962 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 RAPGEF3O95398 923 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 PDE6AP16499 860 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 NAT1P18440 290 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 SARSP49591 514 aaKnown RBP7.11□□□□□ -1.27
VPS8-224ENST00000488255 CYP4F22Q6NT55 531 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.11□□□□□ -1.27
VPS8-224ENST00000488255 SP8Q8IXZ3 490 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 CARFQ8N187 725 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 CISD2Q8N5K1 135 aaKnown RBP7.11□□□□□ -1.27
VPS8-224ENST00000488255 LINC00482Q8N8I6 264 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 JMYQ8N9B5 988 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 PCDH18Q9HCL0 1135 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 CBLCQ9ULV8 474 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 COQ6Q9Y2Z9 468 aa7.11□□□□□ -1.27
VPS8-224ENST00000488255 EFCAB14O75071 495 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 HOXA5P20719 270 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 THBS2P35442 1172 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 ADAM9Q13443 819 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 SQSTM1Q13501 440 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 CRY1Q16526 586 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 PAN2Q504Q3 1202 aaKnown RBP7.1□□□□□ -1.27
VPS8-224ENST00000488255 KCTD1Q719H9 257 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 BRAPQ7Z569 592 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 FGD2Q7Z6J4 655 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 PTRH1Q86Y79 214 aaKnown RBP7.1□□□□□ -1.27
VPS8-224ENST00000488255 TTLL6Q8N841 843 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 SH3RF2Q8TEC5 729 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 RIC8BQ9NVN3 520 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 WASF3Q9UPY6 502 aa7.1□□□□□ -1.27
VPS8-224ENST00000488255 SH3D21A4FU49 640 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 DDX3XO00571 662 aaKnown RBP eCLIP7.09□□□□□ -1.27
VPS8-224ENST00000488255 FAHP16930 419 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 JAM2P57087 298 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 FAM47CQ5HY64 1035 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 HABP4Q5JVS0 413 aaKnown RBP7.09□□□□□ -1.27
VPS8-224ENST00000488255 NT5DC1Q5TFE4 455 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 PRAMEF18Q5VWM3 479 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 TTLL10Q6ZVT0 673 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 C16orf59Q7L2K0 433 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 SCLYQ96I15 445 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 CLIC6Q96NY7 704 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 ADAM7Q9H2U9 754 aa7.09□□□□□ -1.27
VPS8-224ENST00000488255 NCOA5Q9HCD5 579 aaKnown RBP7.09□□□□□ -1.27
VPS8-224ENST00000488255 LUC7LQ9NQ29 371 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms