RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 MRPS9P82933 396 aaKnown RBP16.6■□□□□ 0.25
SDCCAG3-211ENST00000486441 CWC27Q6UX04 472 aaKnown RBP16.6■□□□□ 0.25
SDCCAG3-211ENST00000486441 CYB5R4Q7L1T6 521 aa16.6■□□□□ 0.25
SDCCAG3-211ENST00000486441 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
SDCCAG3-211ENST00000486441 EMSYQ7Z589 1322 aa16.6■□□□□ 0.25
SDCCAG3-211ENST00000486441 KLRF2D3W0D1 207 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 H3BQ06 376 aaPredicted RBP16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 H3BRB1 525 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 ZBTB5O15062 677 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 CYTH3O43739 400 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 AMHP03971 560 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 LGALS2P05162 132 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 SMIM10L2AP0DMW4 78 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 SMIM10L2BP0DMW5 78 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 TCEAL5Q5H9L2 206 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 KCNV1Q6PIU1 500 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 ATP6V0A1Q93050 837 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 DSCC1Q9BVC3 393 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 TUT1Q9H6E5 874 aaKnown RBP16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 RIOX1Q9H6W3 641 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 SENP2Q9HC62 589 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 LAMA4Q16363 1823 aa16.59■□□□□ 0.25
SDCCAG3-211ENST00000486441 C17orf102A2RUQ5 167 aa16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 C19orf67A6NJJ6 358 aa16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 DHX16O60231 1041 aaKnown RBP16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 MFAP1P55081 439 aaKnown RBP16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 GPM6BQ13491 265 aa16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 TMEM192Q8IY95 271 aa16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 SAMD3Q8N6K7 520 aa16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 BANK1Q8NDB2 785 aa16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 PABPC5Q96DU9 382 aaKnown RBP16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 SETD4Q9NVD3 440 aa16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.24
SDCCAG3-211ENST00000486441 CACNA1HO95180 2353 aa16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 FRMPD4Q14CM0 1322 aa16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 IGHDP01880 384 aa16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 ICAM3P32942 547 aa16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 ZP2Q05996 745 aa16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 CTC1Q2NKJ3 1217 aa16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 FAM26DQ5JW98 314 aa16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 PIGSQ96S52 555 aa16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 RC3H2Q9HBD1 1191 aaKnown RBP16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 SUPT16HQ9Y5B9 1047 aaKnown RBP16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 TECTAO75443 2155 aa16.57■□□□□ 0.24
SDCCAG3-211ENST00000486441 COL4A6Q14031 1691 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 ZDBF2Q9HCK1 2354 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 SPATA31C2B4DYI2 1134 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 UPP2O95045 317 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 CTSHP09668 335 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 B4GALNT3Q6L9W6 998 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 SEPT8Q92599 483 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 SAMD11Q96NU1 681 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 INPP4AQ96PE3 977 aaPredicted RBP16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 GPR20Q99678 358 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 KRT23Q9C075 422 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 MLXIPQ9HAP2 919 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 CTNNA3Q9UI47 895 aa16.56■□□□□ 0.24
SDCCAG3-211ENST00000486441 GCOM1H8Y6P7 765 aaPredicted RBP16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 CAND2O75155 1236 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 CHRNA1P02708 482 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 POLR2MP0CAP2 368 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 CCND2P30279 289 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 NUCB1Q02818 461 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 DLX2Q07687 328 aaPredicted RBP16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 GRM4Q14833 912 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 PUS10Q3MIT2 529 aaKnown RBP16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 IFIT1BQ5T764 474 aaKnown RBP16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 ALYREFQ86V81 257 aaKnown RBP16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 CHD1LQ86WJ1 897 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 TRIM50Q86XT4 487 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 EHMT1Q9H9B1 1298 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 TAF6LQ9Y6J9 622 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 USP34Q70CQ2 3546 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 ATG2AQ2TAZ0 1938 aa16.55■□□□□ 0.24
SDCCAG3-211ENST00000486441 C5orf67F2Z3F1 127 aa16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 ALADP13716 330 aa16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 SSTR3P32745 418 aaPredicted RBP16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 TROAPQ12815 778 aa16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 CAMK1Q14012 370 aa16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 PTPROQ16827 1216 aa16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 IMMTQ16891 758 aaKnown RBP16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 TIGD5Q53EQ6 642 aa16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 METTL7BQ6UX53 244 aa16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 CYFIP1Q7L576 1253 aa16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 YME1L1Q96TA2 773 aa16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 NSUN3Q9H649 340 aaKnown RBP16.54■□□□□ 0.24
SDCCAG3-211ENST00000486441 TTC3P53804 2025 aa16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 DOCK5Q9H7D0 1870 aa16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 GRM6O15303 877 aa16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 MGAT3Q09327 533 aa16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 RUFY4Q6ZNE9 571 aa16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 CRIPAKQ8N1N5 446 aa16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 LMBR1Q8WVP7 490 aa16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 UBAC1Q9BSL1 405 aa16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 IFIH1Q9BYX4 1025 aaKnown RBP16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 CNNM2Q9H8M5 875 aa16.53■□□□□ 0.24
SDCCAG3-211ENST00000486441 RTEL1Q9NZ71 1219 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms