RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 SP4Q02446 784 aa20.95■□□□□ 0.94
CLDN11-206ENST00000486429 BFSP2Q13515 415 aa20.95■□□□□ 0.94
CLDN11-206ENST00000486429 ZNF365Q70YC5 407 aa20.95■□□□□ 0.94
CLDN11-206ENST00000486429 RETREG2Q8NC44 543 aa20.95■□□□□ 0.94
CLDN11-206ENST00000486429 GPR20Q99678 358 aa20.95■□□□□ 0.94
CLDN11-206ENST00000486429 C16orf70Q9BSU1 422 aa20.95■□□□□ 0.94
CLDN11-206ENST00000486429 SLC26A6Q9BXS9 759 aa20.95■□□□□ 0.94
CLDN11-206ENST00000486429 MTIF3Q9H2K0 278 aaKnown RBP20.95■□□□□ 0.94
CLDN11-206ENST00000486429 PDRG1Q9NUG6 133 aa20.95■□□□□ 0.94
CLDN11-206ENST00000486429 EIF5BO60841 1220 aaKnown RBP20.94■□□□□ 0.94
CLDN11-206ENST00000486429 KCNA2P16389 499 aa20.94■□□□□ 0.94
CLDN11-206ENST00000486429 NTRK3Q16288 839 aa20.94■□□□□ 0.94
CLDN11-206ENST00000486429 RPUSD2Q8IZ73 545 aaKnown RBP20.94■□□□□ 0.94
CLDN11-206ENST00000486429 CAGE1Q8TC20 777 aa20.94■□□□□ 0.94
CLDN11-206ENST00000486429 JADE2Q9NQC1 790 aa20.94■□□□□ 0.94
CLDN11-206ENST00000486429 TMEM260Q9NX78 707 aa20.94■□□□□ 0.94
CLDN11-206ENST00000486429 H3BRB1 525 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 PFKMP08237 780 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 RFC2P35250 354 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 SREBF1P36956 1147 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 CLK2P49760 499 aaKnown RBP20.93■□□□□ 0.94
CLDN11-206ENST00000486429 ANAPC15P60006 121 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 PKN1Q16512 942 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 ZNF697Q5TEC3 545 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 RASIP1Q5U651 963 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 TRIM22Q8IYM9 498 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 CCDC148Q8NFR7 591 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 CTAGE1Q96RT6 745 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 TUT1Q9H6E5 874 aaKnown RBP20.93■□□□□ 0.94
CLDN11-206ENST00000486429 C6orf50Q9HD87 102 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 PKD2L1Q9P0L9 805 aa20.93■□□□□ 0.94
CLDN11-206ENST00000486429 ZNF215Q9UL58 517 aaPredicted RBP20.93■□□□□ 0.94
CLDN11-206ENST00000486429 LAMA2P24043 3122 aaKnown RBP20.93■□□□□ 0.94
CLDN11-206ENST00000486429 CPLX1O14810 134 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 ATP9AO75110 1047 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 PPFIA3O75145 1194 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 FGBP02675 491 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 JAKMIP3Q5VZ66 844 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 MCTP2Q6DN12 878 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 FAM109BQ6ICB4 259 aaPredicted RBP20.92■□□□□ 0.94
CLDN11-206ENST00000486429 TRIM50Q86XT4 487 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 REXO1Q8N1G1 1221 aaKnown RBP20.92■□□□□ 0.94
CLDN11-206ENST00000486429 AFAP1L1Q8TED9 768 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 HERVK_113Q902F9 699 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 ZNF274Q96GC6 653 aaPredicted RBP20.92■□□□□ 0.94
CLDN11-206ENST00000486429 MXRA8Q9BRK3 442 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 ZMYND12Q9H0C1 365 aa20.92■□□□□ 0.94
CLDN11-206ENST00000486429 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.91■□□□□ 0.94
CLDN11-206ENST00000486429 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.91■□□□□ 0.94
CLDN11-206ENST00000486429 MAFGO15525 162 aa20.91■□□□□ 0.94
CLDN11-206ENST00000486429 GNA11P29992 359 aa20.91■□□□□ 0.94
CLDN11-206ENST00000486429 UTP14CQ5TAP6 766 aaKnown RBP20.91■□□□□ 0.94
CLDN11-206ENST00000486429 CPLX2Q6PUV4 134 aaKnown RBP20.91■□□□□ 0.94
CLDN11-206ENST00000486429 DEFB128Q7Z7B8 93 aa20.91■□□□□ 0.94
CLDN11-206ENST00000486429 DHX38Q92620 1227 aaKnown RBP20.91■□□□□ 0.94
CLDN11-206ENST00000486429 LARP6Q9BRS8 491 aaKnown RBP20.91■□□□□ 0.94
CLDN11-206ENST00000486429 SCN5AQ14524 2016 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 IQCF3P0C7M6 154 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 TCF7P36402 384 aaPredicted RBP20.9■□□□□ 0.94
CLDN11-206ENST00000486429 ARHGAP4P98171 946 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 RBL2Q08999 1139 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 STK3Q13188 491 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 PTK7Q13308 1070 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 CEP55Q53EZ4 464 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 OTOP2Q7RTS6 562 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 KCNH7Q9NS40 1196 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 MTMR10Q9NXD2 777 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 TELO2Q9Y4R8 837 aa20.9■□□□□ 0.94
CLDN11-206ENST00000486429 C17orf102A2RUQ5 167 aa20.89■□□□□ 0.93
CLDN11-206ENST00000486429 SMIM10L2AP0DMW4 78 aa20.89■□□□□ 0.93
CLDN11-206ENST00000486429 SMIM10L2BP0DMW5 78 aa20.89■□□□□ 0.93
CLDN11-206ENST00000486429 SELPP16109 830 aa20.89■□□□□ 0.93
CLDN11-206ENST00000486429 ZNF76P36508 570 aa20.89■□□□□ 0.93
CLDN11-206ENST00000486429 SSRP1Q08945 709 aaKnown RBP20.89■□□□□ 0.93
CLDN11-206ENST00000486429 LRRC8DQ7L1W4 858 aa20.89■□□□□ 0.93
CLDN11-206ENST00000486429 BICD2Q8TD16 824 aa20.89■□□□□ 0.93
CLDN11-206ENST00000486429 VWCEQ96DN2 955 aa20.89■□□□□ 0.93
CLDN11-206ENST00000486429 SDF4Q9BRK5 362 aa20.89■□□□□ 0.93
CLDN11-206ENST00000486429 JPH1Q9HDC5 661 aaPredicted RBP20.89■□□□□ 0.93
CLDN11-206ENST00000486429 CXXC1Q9P0U4 656 aaPredicted RBP20.89■□□□□ 0.93
CLDN11-206ENST00000486429 VPS54Q9P1Q0 977 aa20.89■□□□□ 0.93
CLDN11-206ENST00000486429 TMEM265A0A087WTH1 108 aa20.88■□□□□ 0.93
CLDN11-206ENST00000486429 ZBBXA8MT70 800 aa20.88■□□□□ 0.93
CLDN11-206ENST00000486429 ACTN1P12814 892 aa20.88■□□□□ 0.93
CLDN11-206ENST00000486429 DNAJB2P25686 324 aa20.88■□□□□ 0.93
CLDN11-206ENST00000486429 ZNF200P98182 395 aaPredicted RBP20.88■□□□□ 0.93
CLDN11-206ENST00000486429 CYP2W1Q8TAV3 490 aa20.88■□□□□ 0.93
CLDN11-206ENST00000486429 SEPT1Q8WYJ6 367 aa20.88■□□□□ 0.93
CLDN11-206ENST00000486429 FAM161BQ96MY7 647 aa20.88■□□□□ 0.93
CLDN11-206ENST00000486429 NFASCO94856 1347 aa20.87■□□□□ 0.93
CLDN11-206ENST00000486429 DEXIO95424 95 aa20.87■□□□□ 0.93
CLDN11-206ENST00000486429 HOXC8P31273 242 aa20.87■□□□□ 0.93
CLDN11-206ENST00000486429 HIC1Q14526 733 aa20.87■□□□□ 0.93
CLDN11-206ENST00000486429 TRIM71Q2Q1W2 868 aaKnown RBP20.87■□□□□ 0.93
CLDN11-206ENST00000486429 NIPA1Q7RTP0 329 aa20.87■□□□□ 0.93
CLDN11-206ENST00000486429 SERINC5Q86VE9 423 aa20.87■□□□□ 0.93
CLDN11-206ENST00000486429 ATP6V0A1Q93050 837 aa20.87■□□□□ 0.93
CLDN11-206ENST00000486429 FTOQ9C0B1 505 aaKnown RBP eCLIP20.87■□□□□ 0.93
CLDN11-206ENST00000486429 AGO4Q9HCK5 861 aaKnown RBP20.87■□□□□ 0.93
CLDN11-206ENST00000486429 SH3GLB2Q9NR46 395 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms