RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 DHX15O43143 795 aaKnown RBP19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 UBA1P22314 1058 aaKnown RBP19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 CMA1P23946 247 aa19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 SPIRE1Q08AE8 756 aa19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 PPP2R5CQ13362 524 aa19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 PDIA5Q14554 519 aa19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 TTLL4Q14679 1199 aa19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 TPRNQ4KMQ1 711 aa19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 SHC4Q6S5L8 630 aa19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 FSIP1Q8NA03 581 aa19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 SENP7Q9BQF6 1050 aa19.98■□□□□ 0.79
SMARCD3-212ENST00000485610 PCNTO95613 3336 aa19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 RBM47A0AV96 593 aaKnown RBP19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 ATP9AO75110 1047 aa19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 TXLNAP40222 546 aa19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 ACVR2BQ13705 512 aa19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 GIMAP8Q8ND71 665 aaPredicted RBP19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 TRIB2Q92519 343 aa19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 SYMPKQ92797 1274 aaKnown RBP19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 FAM13BQ9NYF5 915 aa19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 LRWD1Q9UFC0 647 aa19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 ZHX1Q9UKY1 873 aaPredicted RBP19.97■□□□□ 0.79
SMARCD3-212ENST00000485610 MBD3O95983 291 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 CYP2C19P33261 490 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 KRT76Q01546 638 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 NEDD9Q14511 834 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 SPECC1Q5M775 1068 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 MFSD14CQ5VZR4 134 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 TAPT1Q6NXT6 567 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 CCDC73Q6ZRK6 1079 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 OTOP1Q7RTM1 612 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 JPH1Q9HDC5 661 aaPredicted RBP19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 NRBP1Q9UHY1 535 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 CEP350Q5VT06 3117 aa19.96■□□□□ 0.79
SMARCD3-212ENST00000485610 DDX39AO00148 427 aaKnown RBP19.95■□□□□ 0.78
SMARCD3-212ENST00000485610 ARIH2O95376 493 aa19.95■□□□□ 0.78
SMARCD3-212ENST00000485610 NCAPH2Q6IBW4 605 aa19.95■□□□□ 0.78
SMARCD3-212ENST00000485610 CCDC62Q6P9F0 684 aa19.95■□□□□ 0.78
SMARCD3-212ENST00000485610 B3GNT9Q6UX72 402 aa19.95■□□□□ 0.78
SMARCD3-212ENST00000485610 RAET1EQ8TD07 263 aa19.95■□□□□ 0.78
SMARCD3-212ENST00000485610 UNC45AQ9H3U1 944 aa19.95■□□□□ 0.78
SMARCD3-212ENST00000485610 PDGFCQ9NRA1 345 aa19.95■□□□□ 0.78
SMARCD3-212ENST00000485610 DDX41Q9UJV9 622 aaKnown RBP19.95■□□□□ 0.78
SMARCD3-212ENST00000485610 STK24Q9Y6E0 443 aa19.95■□□□□ 0.78
SMARCD3-212ENST00000485610 FAM237AA0A1B0GTK4 181 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 A0A1B0GVL5 298 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 PP2D1A8MPX8 630 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 TXNP10599 105 aaKnown RBP19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 PFKFB1P16118 471 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 UBA7P41226 1012 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 SP2Q02086 613 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 HAUS3Q68CZ6 603 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 ZNF746Q6NUN9 644 aaPredicted RBP19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 USP49Q70CQ1 688 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 ERMNQ8TAM6 284 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 EPSTI1Q96J88 318 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 CCSER1Q9C0I3 900 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 GOLPH3LQ9H4A5 285 aa19.94■□□□□ 0.78
SMARCD3-212ENST00000485610 CHMP2AO43633 222 aa19.93■□□□□ 0.78
SMARCD3-212ENST00000485610 ADCY3O60266 1144 aa19.93■□□□□ 0.78
SMARCD3-212ENST00000485610 GGPS1O95749 300 aa19.93■□□□□ 0.78
SMARCD3-212ENST00000485610 JAK3P52333 1124 aa19.93■□□□□ 0.78
SMARCD3-212ENST00000485610 KRT79Q5XKE5 535 aa19.93■□□□□ 0.78
SMARCD3-212ENST00000485610 SNX29Q8TEQ0 813 aa19.93■□□□□ 0.78
SMARCD3-212ENST00000485610 SLC9A2Q9UBY0 812 aa19.93■□□□□ 0.78
SMARCD3-212ENST00000485610 HPSEQ9Y251 543 aa19.93■□□□□ 0.78
SMARCD3-212ENST00000485610 TRIM17Q9Y577 477 aa19.93■□□□□ 0.78
SMARCD3-212ENST00000485610 EML1O00423 815 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 SLC26A4O43511 780 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 FARP2O94887 1054 aaPredicted RBP19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 ZNF865P0CJ78 1059 aaPredicted RBP19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 CDC25AP30304 524 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 SFNP31947 248 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 ADCYAP1R1P41586 468 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 FAM160A1Q05DH4 1040 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 LY6KQ17RY6 165 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 CCDC144BQ3MJ40 725 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 IQSEC1Q6DN90 963 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 METTL7BQ6UX53 244 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 CYFIP1Q7L576 1253 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 MIER3Q7Z3K6 550 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 CABP7Q86V35 215 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 SMAP1Q8IYB5 467 aaPredicted RBP19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 RDM1Q8NG50 284 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 GPT2Q8TD30 523 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 PXYLP1Q8TE99 480 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 MMTAG2Q9BU76 263 aaKnown RBP19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 KCNH3Q9ULD8 1083 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 FRMPD3Q5JV73 1810 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 KDM3AQ9Y4C1 1321 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 WDR64B1ANS9 1081 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 NKRFO15226 690 aaKnown RBP eCLIP19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 CCNE2O96020 404 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 HMGCRP04035 888 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 HSPA8P11142 646 aaKnown RBP19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 CYBAP13498 195 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 ELNP15502 786 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 LIG1P18858 919 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 NDUFA8P51970 172 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 CELF3Q5SZQ8 465 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms