RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SLC35G1Q2M3R5 365 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 FAM178BQ8IXR5 827 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 FBXO22Q8NEZ5 403 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 KHSRPQ92945 711 aaKnown RBP eCLIP15.09■□□□□ 0.01
HDAC6-227ENST00000485102 ATP6V0A1Q93050 837 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 MRPL38Q96DV4 380 aaKnown RBP15.09■□□□□ 0.01
HDAC6-227ENST00000485102 INPP4AQ96PE3 977 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-227ENST00000485102 RNPEPQ9H4A4 650 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 CD320Q9NPF0 282 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 C11orf16Q9NQ32 467 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 MTUS1Q9ULD2 1270 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 COL4A6Q14031 1691 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 PNMA6FA0A0J9YX94 578 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 CYTH3O43739 400 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 LGALS2P05162 132 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 GNAT1P11488 350 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 ADAM17P78536 824 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 TROAPQ12815 778 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 NEDD9Q14511 834 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 COL19A1Q14993 1142 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 PUS10Q3MIT2 529 aaKnown RBP15.08■□□□□ 0
HDAC6-227ENST00000485102 GNPTABQ3T906 1256 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 METTL7BQ6UX53 244 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 CYB5R4Q7L1T6 521 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.08■□□□□ 0
HDAC6-227ENST00000485102 NEK9Q8TD19 979 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 SEPT8Q92599 483 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 SENP7Q9BQF6 1050 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 C17orf80Q9BSJ5 609 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 HCN4Q9Y3Q4 1203 aa15.08■□□□□ 0
HDAC6-227ENST00000485102 KAT6AQ92794 2004 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 SPATA31C2B4DYI2 1134 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 H3BNC9 293 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 TREHO43280 583 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 SMIM10L2AP0DMW4 78 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 SMIM10L2BP0DMW5 78 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 MRPS9P82933 396 aaKnown RBP15.07■□□□□ 0
HDAC6-227ENST00000485102 TRDNQ13061 729 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 PTPROQ16827 1216 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 EPC2Q52LR7 807 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 FAM26DQ5JW98 314 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 FAM117BQ6P1L5 589 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 XRRA1Q6P2D8 792 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 RPAINQ86UA6 219 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 MYOCDQ8IZQ8 938 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 APBB2Q92870 758 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 GPKOWQ92917 476 aaPredicted RBP eCLIP15.07■□□□□ 04e-7■□□□□ 8.7
HDAC6-227ENST00000485102 PIGSQ96S52 555 aa15.07■□□□□ 0
HDAC6-227ENST00000485102 GRXCR2A6NFK2 248 aa15.06■□□□□ 0
HDAC6-227ENST00000485102 TIGD5Q53EQ6 642 aa15.06■□□□□ 0
HDAC6-227ENST00000485102 FCHSD1Q86WN1 690 aa15.06■□□□□ 0
HDAC6-227ENST00000485102 GJD3Q8N144 294 aa15.06■□□□□ 0
HDAC6-227ENST00000485102 MAP3K14Q99558 947 aa15.06■□□□□ 0
HDAC6-227ENST00000485102 GPR20Q99678 358 aa15.06■□□□□ 0
HDAC6-227ENST00000485102 IL25Q9H293 177 aa15.06■□□□□ 0
HDAC6-227ENST00000485102 BCAS3Q9H6U6 928 aa15.06■□□□□ 0
HDAC6-227ENST00000485102 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
HDAC6-227ENST00000485102 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.05■□□□□ -0
HDAC6-227ENST00000485102 NOP56O00567 594 aaKnown RBP15.05■□□□□ -0
HDAC6-227ENST00000485102 FIBPO43427 364 aa15.05■□□□□ -0
HDAC6-227ENST00000485102 CYP21A2P08686 494 aa15.05■□□□□ -0
HDAC6-227ENST00000485102 KCNA5P22460 613 aa15.05■□□□□ -0
HDAC6-227ENST00000485102 SMARCA1P28370 1054 aa15.05■□□□□ -0
HDAC6-227ENST00000485102 SEMA3FQ13275 785 aa15.05■□□□□ -0
HDAC6-227ENST00000485102 HOMER1Q86YM7 354 aa15.05■□□□□ -0
HDAC6-227ENST00000485102 NRCAMQ92823 1304 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 ERICH2A1L162 156 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 PRR33A8MZF0 331 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 PIK3CDO00329 1044 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 IFIT3O14879 490 aaKnown RBP15.04■□□□□ -0
HDAC6-227ENST00000485102 NCK2O43639 380 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 RB1P06400 928 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 PTCRAQ6ISU1 281 aaPredicted RBP15.04■□□□□ -0
HDAC6-227ENST00000485102 CYFIP1Q7L576 1253 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 TMEM192Q8IY95 271 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 GIMAP8Q8ND71 665 aaPredicted RBP15.04■□□□□ -0
HDAC6-227ENST00000485102 BANK1Q8NDB2 785 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 PABPC5Q96DU9 382 aaKnown RBP15.04■□□□□ -0
HDAC6-227ENST00000485102 YME1L1Q96TA2 773 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 OSBPL7Q9BZF2 842 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 SETD4Q9NVD3 440 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 ZNF215Q9UL58 517 aaPredicted RBP15.04■□□□□ -0
HDAC6-227ENST00000485102 TTC3P53804 2025 aa15.04■□□□□ -0
HDAC6-227ENST00000485102 C5orf67F2Z3F1 127 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 SORBS3O60504 671 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 NEFLP07196 543 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 ALADP13716 330 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 GPM6BQ13491 265 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 WTAPQ15007 396 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 SART3Q15020 963 aaKnown RBP15.03■□□□□ -0
HDAC6-227ENST00000485102 PCNX4Q63HM2 1172 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 RUFY2Q8WXA3 655 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 ZFP91Q96JP5 570 aaPredicted RBP15.03■□□□□ -0
HDAC6-227ENST00000485102 MTA3Q9BTC8 594 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 SPZ1Q9BXG8 430 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 EHMT1Q9H9B1 1298 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 PRKAG3Q9UGI9 489 aa15.03■□□□□ -0
HDAC6-227ENST00000485102 SUPT16HQ9Y5B9 1047 aaKnown RBP15.03■□□□□ -0
HDAC6-227ENST00000485102 RALGAPA2Q2PPJ7 1873 aa15.02■□□□□ -0
HDAC6-227ENST00000485102 POTEB3A0JP26 581 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms