RNA–Protein interactions for RNA: ENST00000484683.1

RPRD1B-205, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-205ENST00000484683 SP2Q02086 613 aa10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 STK3Q13188 491 aa10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 CEP55Q53EZ4 464 aa10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 ZNF697Q5TEC3 545 aa10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 FAM177A1Q8N128 213 aaPredicted RBP10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 SEPT1Q8WYJ6 367 aa10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 WASF1Q92558 559 aa10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 MXRA8Q9BRK3 442 aa10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 FTOQ9C0B1 505 aaKnown RBP eCLIP10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 ZMYND12Q9H0C1 365 aa10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 TUT1Q9H6E5 874 aaKnown RBP10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 UPF2Q9HAU5 1272 aaKnown RBP10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 MYH6P13533 1939 aa10.58□□□□□ -0.72
RPRD1B-205ENST00000484683 NID2Q14112 1375 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 C17orf102A2RUQ5 167 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 LGALS2P05162 132 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 HOXD8P13378 290 aaPredicted RBP10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 SMAD3P84022 425 aaKnown RBP10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 SETQ01105 290 aaPredicted RBP10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 PTK7Q13308 1070 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 TOB2Q14106 344 aaPredicted RBP10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 C9orf50Q5SZB4 431 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 UTP14CQ5TAP6 766 aaKnown RBP10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 JAKMIP3Q5VZ66 844 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 GALNT17Q6IS24 598 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 ZNF365Q70YC5 407 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 DEFB123Q8N688 67 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 AFAP1L1Q8TED9 768 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 KAT2BQ92831 832 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 GLG1Q92896 1179 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 GPR20Q99678 358 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 SMARCAD1Q9H4L7 1026 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 NCOA5Q9HCD5 579 aaKnown RBP10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 JPH1Q9HDC5 661 aaPredicted RBP10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 PKD2L1Q9P0L9 805 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 PCDH10Q9P2E7 1040 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 HDAC6Q9UBN7 1215 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 GTF2IRD1Q9UHL9 959 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 UBIAD1Q9Y5Z9 338 aa10.57□□□□□ -0.72
RPRD1B-205ENST00000484683 ZBBXA8MT70 800 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 ACRP10323 421 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 SELPP16109 830 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 ITGB5P18084 799 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 SREBF1P36956 1147 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 NEK4P51957 841 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 ARHGAP4P98171 946 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 FAM109BQ6ICB4 259 aaPredicted RBP10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 GDF6Q6KF10 455 aaPredicted RBP10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 DEFB128Q7Z7B8 93 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 RSPH3Q86UC2 560 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 ATP6V0A1Q93050 837 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 KCNH7Q9NS40 1196 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 ERAP1Q9NZ08 941 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 SLC9A2Q9UBY0 812 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 MSRAQ9UJ68 235 aa10.56□□□□□ -0.72
RPRD1B-205ENST00000484683 ALPK3Q96L96 1907 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 HAS3O00219 553 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 SOX1O00570 391 aaPredicted RBP10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 PPFIA3O75145 1194 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 RPLP2P05387 115 aaKnown RBP10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 IQCF3P0C7M6 154 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 KCNA2P16389 499 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 TCF7P36402 384 aaPredicted RBP10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 RAB30Q15771 203 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 NTRK3Q16288 839 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 PKN1Q16512 942 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 TMEM240Q5SV17 173 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 TYW1BQ6NUM6 668 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 LRRC8DQ7L1W4 858 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 NIPA1Q7RTP0 329 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 OTOP2Q7RTS6 562 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 PLA2G4DQ86XP0 818 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 HERVK_113Q902F9 699 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 SCLYQ96I15 445 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 PGBD1Q96JS3 809 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 LARP6Q9BRS8 491 aaKnown RBP10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 C16orf70Q9BSU1 422 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 BRMS1Q9HCU9 246 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 TBC1D22BQ9NU19 505 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 TMEM260Q9NX78 707 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 VPS54Q9P1Q0 977 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 SLC4A7Q9Y6M7 1214 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 NFASCO94856 1347 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 NRCAMQ92823 1304 aa10.55□□□□□ -0.72
RPRD1B-205ENST00000484683 TMEM265A0A087WTH1 108 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 LRRC37A2A6NM11 1700 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 KIF28PB7ZC32 967 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 MEIS1O00470 390 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 BACH1O14867 736 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 PFKFB2O60825 505 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 EFCAB14O75071 495 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 ATP9AO75110 1047 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 CYP3A4P08684 503 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 SMIM10L2AP0DMW4 78 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 SMIM10L2BP0DMW5 78 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 THPOP40225 353 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 KCNJ6P48051 423 aa10.54□□□□□ -0.72
RPRD1B-205ENST00000484683 CLK2P49760 499 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms