RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 IRS1P35568 1242 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 MRE11P49959 708 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 ADAM17P78536 824 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 MRPS9P82933 396 aaKnown RBP15.01□□□□□ -0.01
UBR4-213ENST00000483922 SEMA3FQ13275 785 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 CTC1Q2NKJ3 1217 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 TICAM2Q86XR7 235 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 UIMC1Q96RL1 719 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 IL25Q9H293 177 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 TUT1Q9H6E5 874 aaKnown RBP15.01□□□□□ -0.01
UBR4-213ENST00000483922 MAD2L2Q9UI95 211 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 ATG2AQ2TAZ0 1938 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 MYO7AQ13402 2215 aa15.01□□□□□ -0.01
UBR4-213ENST00000483922 TRIM6-TRIM34B2RNG4 842 aa15□□□□□ -0.01
UBR4-213ENST00000483922 GRM6O15303 877 aa15□□□□□ -0.01
UBR4-213ENST00000483922 LGALS2P05162 132 aa15□□□□□ -0.01
UBR4-213ENST00000483922 CTSHP09668 335 aa15□□□□□ -0.01
UBR4-213ENST00000483922 GTF2F1P35269 517 aaKnown RBP eCLIP15□□□□□ -0.01
UBR4-213ENST00000483922 SEC23AQ15436 765 aa15□□□□□ -0.01
UBR4-213ENST00000483922 PUS10Q3MIT2 529 aaKnown RBP15□□□□□ -0.01
UBR4-213ENST00000483922 FAM26DQ5JW98 314 aa15□□□□□ -0.01
UBR4-213ENST00000483922 HFE2Q6ZVN8 426 aa15□□□□□ -0.01
UBR4-213ENST00000483922 CYB5R4Q7L1T6 521 aa15□□□□□ -0.01
UBR4-213ENST00000483922 RILPL2Q969X0 211 aa15□□□□□ -0.01
UBR4-213ENST00000483922 SAMD11Q96NU1 681 aa15□□□□□ -0.01
UBR4-213ENST00000483922 YME1L1Q96TA2 773 aa15□□□□□ -0.01
UBR4-213ENST00000483922 AMNQ9BXJ7 453 aa15□□□□□ -0.01
UBR4-213ENST00000483922 SETD4Q9NVD3 440 aa15□□□□□ -0.01
UBR4-213ENST00000483922 CTNNA3Q9UI47 895 aa15□□□□□ -0.01
UBR4-213ENST00000483922 PALM3A6NDB9 673 aaPredicted RBP14.99□□□□□ -0.01
UBR4-213ENST00000483922 KLRF2D3W0D1 207 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 CYTH3O43739 400 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 DHX16O60231 1041 aaKnown RBP14.99□□□□□ -0.01
UBR4-213ENST00000483922 CHRNA1P02708 482 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 TGFB3P10600 412 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 HYAL1Q12794 435 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 CAMK1Q14012 370 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 PTPROQ16827 1216 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 IQCA1Q86XH1 822 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 SEPT8Q92599 483 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 LNPKQ9C0E8 428 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 NSUN3Q9H649 340 aaKnown RBP14.99□□□□□ -0.01
UBR4-213ENST00000483922 MLXIPQ9HAP2 919 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 RC3H2Q9HBD1 1191 aaKnown RBP14.99□□□□□ -0.01
UBR4-213ENST00000483922 SENP2Q9HC62 589 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 PCDHA1Q9Y5I3 950 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 COL4A6Q14031 1691 aa14.99□□□□□ -0.01
UBR4-213ENST00000483922 SPATA31C2B4DYI2 1134 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 ZBTB5O15062 677 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 LINC01565O15544 149 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 HDAC1Q13547 482 aaPredicted RBP14.98□□□□□ -0.01
UBR4-213ENST00000483922 TIGD5Q53EQ6 642 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 CCDC178Q5BJE1 867 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 KCNV1Q6PIU1 500 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 CWC27Q6UX04 472 aaKnown RBP14.98□□□□□ -0.01
UBR4-213ENST00000483922 RPAINQ86UA6 219 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 TRIM50Q86XT4 487 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 ADHFE1Q8IWW8 467 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 PIGSQ96S52 555 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 PHOX2BQ99453 314 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 GPR20Q99678 358 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 RIOX1Q9H6W3 641 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 CLDND1Q9NY35 253 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 MAP3K20Q9NYL2 800 aaKnown RBP14.98□□□□□ -0.01
UBR4-213ENST00000483922 PRKAG3Q9UGI9 489 aa14.98□□□□□ -0.01
UBR4-213ENST00000483922 DMDP11532 3685 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 LAMA4Q16363 1823 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 C5orf67F2Z3F1 127 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 MBTPS2O43462 519 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 ICAM3P32942 547 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 BMPR1AP36894 532 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 CLUL1Q15846 466 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 RUFY4Q6ZNE9 571 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 EP400NLQ6ZTU2 488 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 CYFIP1Q7L576 1253 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 PLEKHM2Q8IWE5 1019 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 ZNF689Q96CS4 500 aaPredicted RBP14.97□□□□□ -0.01
UBR4-213ENST00000483922 IFIH1Q9BYX4 1025 aaKnown RBP14.97□□□□□ -0.01
UBR4-213ENST00000483922 EHMT1Q9H9B1 1298 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 MYH6P13533 1939 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 NLRC5Q86WI3 1866 aa14.97□□□□□ -0.01
UBR4-213ENST00000483922 ZNF318Q5VUA4 2279 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 ENPP3O14638 875 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 TBX10O75333 385 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 DNAJB1P25685 340 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 CCND2P30279 289 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 MGAT3Q09327 533 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 SMAD2Q15796 467 aaKnown RBP14.96□□□□□ -0.01
UBR4-213ENST00000483922 FCHSD1Q86WN1 690 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 CRIPAKQ8N1N5 446 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 LMBR1Q8WVP7 490 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 IL17RAQ96F46 866 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 RTEL1Q9NZ71 1219 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 MUTYHQ9UIF7 546 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 MYO15AQ9UKN7 3530 aa14.96□□□□□ -0.01
UBR4-213ENST00000483922 FRMPD4Q14CM0 1322 aa14.95□□□□□ -0.02
UBR4-213ENST00000483922 DOCK5Q9H7D0 1870 aa14.95□□□□□ -0.02
UBR4-213ENST00000483922 GCOM1H8Y6P7 765 aaPredicted RBP14.95□□□□□ -0.02
UBR4-213ENST00000483922 POLR2MP0CAP2 368 aa14.95□□□□□ -0.02
UBR4-213ENST00000483922 LPIN1Q14693 890 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms