RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 RNPEPQ9H4A4 650 aa20.79■□□□□ 0.92
ATG4B-221ENST00000483778 TUT1Q9H6E5 874 aaKnown RBP20.79■□□□□ 0.92
ATG4B-221ENST00000483778 MTCH2Q9Y6C9 303 aa20.79■□□□□ 0.92
ATG4B-221ENST00000483778 TREHO43280 583 aa20.78■□□□□ 0.92
ATG4B-221ENST00000483778 BAIAP3O94812 1187 aa20.78■□□□□ 0.92
ATG4B-221ENST00000483778 SMIM10L2AP0DMW4 78 aa20.78■□□□□ 0.92
ATG4B-221ENST00000483778 SMIM10L2BP0DMW5 78 aa20.78■□□□□ 0.92
ATG4B-221ENST00000483778 SMARCA1P28370 1054 aa20.78■□□□□ 0.92
ATG4B-221ENST00000483778 HOXC8P31273 242 aa20.78■□□□□ 0.92
ATG4B-221ENST00000483778 SMARCC2Q8TAQ2 1214 aa20.78■□□□□ 0.92
ATG4B-221ENST00000483778 ASB2Q96Q27 587 aa20.78■□□□□ 0.92
ATG4B-221ENST00000483778 COL4A4P53420 1690 aaPredicted RBP20.77■□□□□ 0.92
ATG4B-221ENST00000483778 BRWD1Q9NSI6 2320 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 CCDC69A6NI79 296 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 TLL1O43897 1013 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 ATP9AO75110 1047 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 KIF5BP33176 963 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 THPOP40225 353 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 SP4Q02446 784 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 TFF2Q03403 129 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 UBE2SQ16763 222 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 FAM117BQ6P1L5 589 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.77■□□□□ 0.92
ATG4B-221ENST00000483778 ATP6V0A1Q93050 837 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 TMEM87BQ96K49 555 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 MTA3Q9BTC8 594 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 ANO2Q9NQ90 1003 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 SETD4Q9NVD3 440 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 THEGQ9P2T0 379 aa20.77■□□□□ 0.92
ATG4B-221ENST00000483778 PIK3CDO00329 1044 aa20.76■□□□□ 0.91
ATG4B-221ENST00000483778 LPXNO60711 386 aa20.76■□□□□ 0.91
ATG4B-221ENST00000483778 POU3F3P20264 500 aaPredicted RBP20.76■□□□□ 0.91
ATG4B-221ENST00000483778 LIFRP42702 1097 aa20.76■□□□□ 0.91
ATG4B-221ENST00000483778 KCNJ6P48051 423 aa20.76■□□□□ 0.91
ATG4B-221ENST00000483778 UTP14CQ5TAP6 766 aaKnown RBP20.76■□□□□ 0.91
ATG4B-221ENST00000483778 PCNX4Q63HM2 1172 aa20.76■□□□□ 0.91
ATG4B-221ENST00000483778 METTL7BQ6UX53 244 aa20.76■□□□□ 0.91
ATG4B-221ENST00000483778 TMTC2Q8N394 836 aa20.76■□□□□ 0.91
ATG4B-221ENST00000483778 ATXN2LQ8WWM7 1075 aaKnown RBP20.76■□□□□ 0.91
ATG4B-221ENST00000483778 SYMPKQ92797 1274 aaKnown RBP20.76■□□□□ 0.91
ATG4B-221ENST00000483778 TCEANC2Q96MN5 208 aa20.76■□□□□ 0.91
ATG4B-221ENST00000483778 ABHD14A-ACY1A0A1B0GW23 586 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 C17orf102A2RUQ5 167 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 KIF28PB7ZC32 967 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 FIBPO43427 364 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 STAM2O75886 525 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 GRB10Q13322 594 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 MKRN4PQ13434 485 aaPredicted RBP20.75■□□□□ 0.91
ATG4B-221ENST00000483778 NEDD9Q14511 834 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 GNPTABQ3T906 1256 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 FANCBQ8NB91 859 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 DBF4BQ8NFT6 615 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 LZTS2Q9BRK4 669 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 ZBED2Q9BTP6 218 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 PSTPIP2Q9H939 334 aa20.75■□□□□ 0.91
ATG4B-221ENST00000483778 SEC63Q9UGP8 760 aaKnown RBP20.75■□□□□ 0.91
ATG4B-221ENST00000483778 BDP1A6H8Y1 2624 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 LOXHD1Q8IVV2 1947 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 SIP14410 1827 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 RSPH10B2B2RC85 870 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 NOP56O00567 594 aaKnown RBP20.74■□□□□ 0.91
ATG4B-221ENST00000483778 LGR5O75473 907 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 PARNO95453 639 aaKnown RBP20.74■□□□□ 0.91
ATG4B-221ENST00000483778 RSPH10BP0C881 870 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 ITGB5P18084 799 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 GNAQP50148 359 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 MRPS5P82675 430 aaKnown RBP20.74■□□□□ 0.91
ATG4B-221ENST00000483778 IKBKEQ14164 716 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 TMTC3Q6ZXV5 915 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 CUL5Q93034 780 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 USP26Q9BXU7 913 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 BRPF3Q9ULD4 1205 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 SLC12A7Q9Y666 1083 aa20.74■□□□□ 0.91
ATG4B-221ENST00000483778 GJB5O95377 273 aa20.73■□□□□ 0.91
ATG4B-221ENST00000483778 ADAM17P78536 824 aa20.73■□□□□ 0.91
ATG4B-221ENST00000483778 EXOSC10Q01780 885 aaKnown RBP20.73■□□□□ 0.91
ATG4B-221ENST00000483778 ADCK5Q3MIX3 580 aa20.73■□□□□ 0.91
ATG4B-221ENST00000483778 NECAB3Q96P71 396 aaPredicted RBP20.73■□□□□ 0.91
ATG4B-221ENST00000483778 MUC3AQ02505 3323 aa20.73■□□□□ 0.91
ATG4B-221ENST00000483778 XIRP2A4UGR9 3374 aa20.73■□□□□ 0.91
ATG4B-221ENST00000483778 GSTTP1A0A1W2PQM5 241 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 CTSHP09668 335 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 KCNA2P16389 499 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 PLEKHG4Q58EX7 1191 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 TYW1BQ6NUM6 668 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 SGMS1Q86VZ5 419 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 MICU3Q86XE3 530 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 SENP7Q9BQF6 1050 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 PKD2L1Q9P0L9 805 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 MTUS1Q9ULD2 1270 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 UBIAD1Q9Y5Z9 338 aa20.72■□□□□ 0.91
ATG4B-221ENST00000483778 LINC01553A4QN01 128 aa20.71■□□□□ 0.91
ATG4B-221ENST00000483778 CALM1P0DP23 149 aa20.71■□□□□ 0.91
ATG4B-221ENST00000483778 CALM2P0DP24 149 aa20.71■□□□□ 0.91
ATG4B-221ENST00000483778 CALM3P0DP25 149 aa20.71■□□□□ 0.91
ATG4B-221ENST00000483778 BMP1P13497 986 aa20.71■□□□□ 0.91
ATG4B-221ENST00000483778 KCNQ1P51787 676 aa20.71■□□□□ 0.91
ATG4B-221ENST00000483778 FUT2Q10981 343 aa20.71■□□□□ 0.91
ATG4B-221ENST00000483778 BMP2KLQ5H9B9 411 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms