RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 NCAPH2Q6IBW4 605 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 NIPA1Q7RTP0 329 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 SNX29Q8TEQ0 813 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 CRYGNQ8WXF5 182 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 MMP19Q99542 508 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 MXRA8Q9BRK3 442 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 ZNF577Q9BSK1 485 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 CCSER1Q9C0I3 900 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 KCNMB3Q9NPA1 279 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 COL20A1Q9P218 1284 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 SERTAD1Q9UHV2 236 aa14.02□□□□□ -0.17
TSPAN1-208ENST00000482928 TESPA1A2RU30 521 aaPredicted RBP14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 GAS7O60861 476 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 CNMDO75829 334 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 SMC2O95347 1197 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 FCER1AP12319 257 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 INHBEP58166 350 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 MTMR1Q13613 665 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 KARSQ15046 597 aaKnown RBP14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 GNPTABQ3T906 1256 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 LONRF3Q496Y0 759 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 LRCH2Q5VUJ6 765 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 USP49Q70CQ1 688 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 TDHQ8IZJ6 230 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 ANKRD13CQ8N6S4 541 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 IGSF22Q8N9C0 903 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 SHCBP1Q8NEM2 672 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 DNERQ8NFT8 737 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 HAS1Q92839 578 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 UIMC1Q96RL1 719 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 GDF15Q99988 308 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 PDCD2LQ9BRP1 358 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 TEKT3Q9BXF9 490 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 WDR11Q9BZH6 1224 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 CUEDC2Q9H467 287 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 DISC1Q9NRI5 854 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 RBPJLQ9UBG7 517 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 IVNS1ABPQ9Y6Y0 642 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 SMCHD1A6NHR9 2005 aa14.01□□□□□ -0.17
TSPAN1-208ENST00000482928 FRMPD4Q14CM0 1322 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 POTEMA6NI47 508 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 PP2D1A8MPX8 630 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 MSH4O15457 936 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 SLC26A4O43511 780 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 STAM2O75886 525 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 SLFN14P0C7P3 912 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 CDC25AP30304 524 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 CCT6AP40227 531 aaKnown RBP14□□□□□ -0.17
TSPAN1-208ENST00000482928 PDE4DQ08499 809 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 POSTNQ15063 836 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 STX1AQ16623 288 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 ELOA2Q8IYF1 753 aaPredicted RBP14□□□□□ -0.17
TSPAN1-208ENST00000482928 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 ETNPPLQ8TBG4 499 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 CDHR1Q96JP9 859 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 IWS1Q96ST2 819 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 C1QTNF1Q9BXJ1 281 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 NT5C3AQ9H0P0 336 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 MAGEF1Q9HAY2 307 aa14□□□□□ -0.17
TSPAN1-208ENST00000482928 ZCCHC17Q9NP64 241 aaKnown RBP14□□□□□ -0.17
TSPAN1-208ENST00000482928 IGLV3-22A0A075B6J6 115 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 MEIS1O00470 390 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 ACTN4O43707 911 aaKnown RBP13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 EDIL3O43854 480 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 PEX10O60683 326 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 NR3C2P08235 984 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 BCRP11274 1271 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 AFMP43652 599 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 AMPD3Q01432 767 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 TYRO3Q06418 890 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 TAF1CQ15572 869 aaPredicted RBP13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 STXBP2Q15833 593 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 IL31RAQ8NI17 732 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 CYP2W1Q8TAV3 490 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 SH3TC2Q8TF17 1288 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 SMARCE1Q969G3 411 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 CCDC47Q96A33 483 aaKnown RBP13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 ZFP91Q96JP5 570 aaPredicted RBP13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 PLIN2Q99541 437 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 TXNRD2Q9NNW7 524 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 JADE2Q9NQC1 790 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 ANO10Q9NW15 660 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 PKD2L1Q9P0L9 805 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 UBIAD1Q9Y5Z9 338 aa13.99□□□□□ -0.17
TSPAN1-208ENST00000482928 IPO5O00410 1097 aaKnown RBP13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 CHMP2AO43633 222 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 PLCG1P19174 1290 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 PNOCQ13519 176 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 FAM109BQ6ICB4 259 aaPredicted RBP13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 RBM43Q6ZSC3 357 aaKnown RBP13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 UBE2Q1Q7Z7E8 422 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 ANP32BQ92688 251 aaKnown RBP13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 SLC5A5Q92911 643 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 GJA10Q969M2 543 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 LENG9Q96B70 501 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 GPRASP2Q96D09 838 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 RIT2Q99578 217 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 LRRC27Q9C0I9 530 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 NAT10Q9H0A0 1025 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms