RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 SLC16A2P36021 539 aa16.95■□□□□ 0.3
C9orf3-218ENST00000482056 GFPT1Q06210 699 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-218ENST00000482056 KCNMA1Q12791 1236 aa16.95■□□□□ 0.3
C9orf3-218ENST00000482056 HERC4Q5GLZ8 1057 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-218ENST00000482056 FAM83BQ5T0W9 1011 aa16.95■□□□□ 0.3
C9orf3-218ENST00000482056 HHIPL2Q6UWX4 724 aa16.95■□□□□ 0.3
C9orf3-218ENST00000482056 KCTD1Q719H9 257 aa16.95■□□□□ 0.3
C9orf3-218ENST00000482056 TEKT1Q969V4 418 aa16.95■□□□□ 0.3
C9orf3-218ENST00000482056 EHD4Q9H223 541 aa16.95■□□□□ 0.3
C9orf3-218ENST00000482056 LRRC4BQ9NT99 713 aa16.95■□□□□ 0.3
C9orf3-218ENST00000482056 STK24Q9Y6E0 443 aa16.95■□□□□ 0.3
C9orf3-218ENST00000482056 PITPNM2Q9BZ72 1349 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 KLRG2A4D1S0 409 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-218ENST00000482056 ZMYND10O75800 440 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 SYF2O95926 243 aaKnown RBP16.94■□□□□ 0.3
C9orf3-218ENST00000482056 RASSF7Q02833 373 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 GLE1Q53GS7 698 aaKnown RBP16.94■□□□□ 0.3
C9orf3-218ENST00000482056 HGSNATQ68CP4 663 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 NFRKBQ6P4R8 1299 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 MOXD1Q6UVY6 613 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 GLIS3Q8NEA6 775 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 ERMNQ8TAM6 284 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 AENQ8WTP8 325 aaKnown RBP16.94■□□□□ 0.3
C9orf3-218ENST00000482056 DCAF4Q8WV16 495 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 NLRC4Q9NPP4 1024 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 ATP6V0A2Q9Y487 856 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 ATAD5Q96QE3 1844 aa16.94■□□□□ 0.3
C9orf3-218ENST00000482056 GOLGA6BA6NDN3 693 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 E9PMD0 336 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 G3V3G9 751 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 TULP2O00295 520 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 SLC1A4P43007 532 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 POLR2FP61218 127 aaKnown RBP16.93■□□□□ 0.3
C9orf3-218ENST00000482056 RAD51AP2Q09MP3 1159 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 AP3B2Q13367 1082 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 CFAP221Q4G0U5 840 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 DCAF8Q5TAQ9 597 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 TRIM59Q8IWR1 403 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 CYP3A7-CYP3A51PA0A087WV96 503 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 CETN3O15182 167 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 ERCC3P19447 782 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 CYP3A7P24462 503 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 EPHB4P54760 987 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 EDRF1Q3B7T1 1238 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 CDC42EP5Q6NZY7 148 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 NELFCDQ8IXH7 590 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 ANO3Q9BYT9 981 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 KCNMB3Q9NPA1 279 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 TBC1D7Q9P0N9 293 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 PCDHA1Q9Y5I3 950 aa16.93■□□□□ 0.3
C9orf3-218ENST00000482056 GGCXP38435 758 aa16.92■□□□□ 0.3
C9orf3-218ENST00000482056 ADAM9Q13443 819 aa16.92■□□□□ 0.3
C9orf3-218ENST00000482056 QRICH1Q2TAL8 776 aa16.92■□□□□ 0.3
C9orf3-218ENST00000482056 CERS5Q8N5B7 392 aa16.92■□□□□ 0.3
C9orf3-218ENST00000482056 LRRC1Q9BTT6 524 aa16.92■□□□□ 0.3
C9orf3-218ENST00000482056 TMX4Q9H1E5 349 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-218ENST00000482056 STIM2Q9P246 746 aa16.92■□□□□ 0.3
C9orf3-218ENST00000482056 PCDHA2Q9Y5H9 948 aa16.92■□□□□ 0.3
C9orf3-218ENST00000482056 POTEB3A0JP26 581 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 POTECB2RU33 542 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 POLRMTO00411 1230 aaKnown RBP16.91■□□□□ 0.3
C9orf3-218ENST00000482056 NOL4O94818 638 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 PRPF6O94906 941 aaKnown RBP16.91■□□□□ 0.3
C9orf3-218ENST00000482056 MYBL2P10244 700 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 CYP11B2P19099 503 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 TNFRSF8P28908 595 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 MATR3P43243 847 aaKnown RBP eCLIP16.91■□□□□ 0.3
C9orf3-218ENST00000482056 ASIC2Q16515 512 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 SLC27A3Q5K4L6 730 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 C8orf74Q6P047 294 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 EMBQ6PCB8 327 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 POTEBQ6S5H4 581 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 SND1Q7KZF4 910 aaKnown RBP eCLIP16.91■□□□□ 0.3
C9orf3-218ENST00000482056 ZC3H3Q8IXZ2 948 aaKnown RBP16.91■□□□□ 0.3
C9orf3-218ENST00000482056 GSPT2Q8IYD1 628 aaKnown RBP16.91■□□□□ 0.3
C9orf3-218ENST00000482056 ZBTB9Q96C00 473 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 TBX3O15119 743 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 BUB1O43683 1085 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 RAD21O60216 631 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 OPA1O60313 960 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 SCNN1DP51172 638 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 DDR1Q08345 913 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 RAPGEF1Q13905 1077 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 NAB2Q15742 525 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 CDC37Q16543 378 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-218ENST00000482056 SLC18A3Q16572 532 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 C10orf76Q5T2E6 689 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 KLHDC7AQ5VTJ3 777 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 ANKRD13CQ8N6S4 541 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 FAM76AQ8TAV0 307 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 SCFD1Q8WVM8 642 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 GJA10Q969M2 543 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 GDAP1L1Q96MZ0 367 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 MBOAT7Q96N66 472 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 TLR10Q9BXR5 811 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 TRIM34Q9BYJ4 488 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
C9orf3-218ENST00000482056 KCTD10Q9H3F6 313 aa16.91■□□□□ 0.3
C9orf3-218ENST00000482056 NYAP2Q9P242 653 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms