RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 LENG9Q96B70 501 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 CDHR1Q96JP9 859 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 UIMC1Q96RL1 719 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 KATNBL1Q9H079 304 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 POLR3EQ9NVU0 708 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 CEP131Q9UPN4 1083 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 MRVI1Q9Y6F6 885 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 SPATA31C2B4DYI2 1134 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 TGFB3P10600 412 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 KRT85P78386 507 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 CACNB2Q08289 660 aaPredicted RBP13.09□□□□□ -0.31
HPS4-212ENST00000481910 TRIM32Q13049 653 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 CALCRLQ16602 461 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 TAPT1Q6NXT6 567 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 KCNV1Q6PIU1 500 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 SCFD2Q8WU76 684 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 PKD2L1Q9P0L9 805 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
HPS4-212ENST00000481910 MSH4O15457 936 aa13.08□□□□□ -0.32
HPS4-212ENST00000481910 BAG4O95429 457 aaKnown RBP13.08□□□□□ -0.32
HPS4-212ENST00000481910 BMP15O95972 392 aa13.08□□□□□ -0.32
HPS4-212ENST00000481910 ZNF865P0CJ78 1059 aaPredicted RBP13.08□□□□□ -0.32
HPS4-212ENST00000481910 TXNP10599 105 aaKnown RBP13.08□□□□□ -0.32
HPS4-212ENST00000481910 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
HPS4-212ENST00000481910 ICAM3P32942 547 aa13.08□□□□□ -0.32
HPS4-212ENST00000481910 ADCYAP1R1P41586 468 aa13.08□□□□□ -0.32
HPS4-212ENST00000481910 TTLL4Q14679 1199 aa13.08□□□□□ -0.32
HPS4-212ENST00000481910 CCDC144BQ3MJ40 725 aa13.08□□□□□ -0.32
HPS4-212ENST00000481910 GJA10Q969M2 543 aa13.08□□□□□ -0.32
HPS4-212ENST00000481910 TMEM60Q9H2L4 133 aa13.08□□□□□ -0.32
HPS4-212ENST00000481910 AGO4Q9HCK5 861 aaKnown RBP13.08□□□□□ -0.32
HPS4-212ENST00000481910 NRBP1Q9UHY1 535 aa13.08□□□□□ -0.32
HPS4-212ENST00000481910 LAD1O00515 517 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 TBX3O15119 743 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 ATP9AO75110 1047 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 CYBAP13498 195 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 CNGA1P29973 690 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 NASPP49321 788 aaPredicted RBP13.07□□□□□ -0.32
HPS4-212ENST00000481910 SP2Q02086 613 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 SEMA3FQ13275 785 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 STK38Q15208 465 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 PKN2Q16513 984 aaKnown RBP13.07□□□□□ -0.32
HPS4-212ENST00000481910 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 SLFN12Q8IYM2 578 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 C4orf32Q8N8J7 132 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 ETNPPLQ8TBG4 499 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 SH3TC2Q8TF17 1288 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 HAS1Q92839 578 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 KCNMB3Q9NPA1 279 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 DDX41Q9UJV9 622 aaKnown RBP13.07□□□□□ -0.32
HPS4-212ENST00000481910 RBM47A0AV96 593 aaKnown RBP13.07□□□□□ -0.32
HPS4-212ENST00000481910 INHAP05111 366 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 OR52Z1P0C646 297 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 TXKP42681 527 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 SLC39A14Q15043 492 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 PTPAQ15257 358 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 SLC9C1Q4G0N8 1177 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 FBXO46Q6PJ61 603 aaPredicted RBP13.07□□□□□ -0.32
HPS4-212ENST00000481910 LINC00301Q8NCQ3 95 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 FAM20AQ96MK3 541 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 MTMR9Q96QG7 549 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 RRAGDQ9NQL2 400 aaPredicted RBP13.07□□□□□ -0.32
HPS4-212ENST00000481910 FAM184BQ9ULE4 1060 aa13.07□□□□□ -0.32
HPS4-212ENST00000481910 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.06□□□□□ -0.32
HPS4-212ENST00000481910 ARIH2O95376 493 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 ATP2C1P98194 919 aaPredicted RBP13.06□□□□□ -0.32
HPS4-212ENST00000481910 TNFAIP2Q03169 654 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 NEDD9Q14511 834 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 TMEM63BQ5T3F8 832 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 CCDC62Q6P9F0 684 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 TRPV1Q8NER1 839 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 SLC5A5Q92911 643 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 SPATA32Q96LK8 384 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 SENP7Q9BQF6 1050 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 SDF4Q9BRK5 362 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 SCAND2PQ9GZW5 306 aaPredicted RBP13.06□□□□□ -0.32
HPS4-212ENST00000481910 TTC12Q9H892 705 aaPredicted RBP13.06□□□□□ -0.32
HPS4-212ENST00000481910 TBC1D22BQ9NU19 505 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 PCDHA12Q9UN75 941 aa13.06□□□□□ -0.32
HPS4-212ENST00000481910 VGLL3A8MV65 326 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 DDX39AO00148 427 aaKnown RBP13.05□□□□□ -0.32
HPS4-212ENST00000481910 SPTLC2O15270 562 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 SORBS3O60504 671 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 GAS7O60861 476 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 YEATS4O95619 227 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 AKR1A1P14550 325 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 KCNA2P16389 499 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 SMPD1P17405 629 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 UBA1P22314 1058 aaKnown RBP13.05□□□□□ -0.32
HPS4-212ENST00000481910 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
HPS4-212ENST00000481910 CCND3P30281 292 aaPredicted RBP13.05□□□□□ -0.32
HPS4-212ENST00000481910 ITGB3BPQ13352 177 aaPredicted RBP13.05□□□□□ -0.32
HPS4-212ENST00000481910 DUSP28Q4G0W2 176 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 MAP3K21Q5TCX8 1036 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 LRCH2Q5VUJ6 765 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 ARL6IP4Q66PJ3 421 aaKnown RBP13.05□□□□□ -0.32
HPS4-212ENST00000481910 GIMAP8Q8ND71 665 aaPredicted RBP13.05□□□□□ -0.32
HPS4-212ENST00000481910 RIT2Q99578 217 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms