RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 GH1P01241 217 aa23.42■■□□□ 1.34
VPS16-207ENST00000481812 CNGA1P29973 690 aa23.42■■□□□ 1.34
VPS16-207ENST00000481812 NKX3-2P78367 333 aa23.42■■□□□ 1.34
VPS16-207ENST00000481812 ITGB3BPQ13352 177 aaPredicted RBP23.42■■□□□ 1.34
VPS16-207ENST00000481812 LAMC2Q13753 1193 aa23.42■■□□□ 1.34
VPS16-207ENST00000481812 METTL7BQ6UX53 244 aa23.42■■□□□ 1.34
VPS16-207ENST00000481812 LINC00301Q8NCQ3 95 aa23.42■■□□□ 1.34
VPS16-207ENST00000481812 TFIP11Q9UBB9 837 aaKnown RBP23.42■■□□□ 1.34
VPS16-207ENST00000481812 ADCY6O43306 1168 aa23.41■■□□□ 1.34
VPS16-207ENST00000481812 GAS7O60861 476 aa23.41■■□□□ 1.34
VPS16-207ENST00000481812 GGPS1O95749 300 aa23.41■■□□□ 1.34
VPS16-207ENST00000481812 LRCH2Q5VUJ6 765 aa23.41■■□□□ 1.34
VPS16-207ENST00000481812 DHX37Q8IY37 1157 aaKnown RBP23.41■■□□□ 1.34
VPS16-207ENST00000481812 TEKT3Q9BXF9 490 aa23.41■■□□□ 1.34
VPS16-207ENST00000481812 MCOLN1Q9GZU1 580 aa23.41■■□□□ 1.34
VPS16-207ENST00000481812 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.41■■□□□ 1.34
VPS16-207ENST00000481812 PAK6Q9NQU5 681 aaPredicted RBP23.41■■□□□ 1.34
VPS16-207ENST00000481812 DDX20Q9UHI6 824 aaKnown RBP23.41■■□□□ 1.34
VPS16-207ENST00000481812 RCOR1Q9UKL0 485 aa23.41■■□□□ 1.34
VPS16-207ENST00000481812 PCDHA12Q9UN75 941 aa23.41■■□□□ 1.34
VPS16-207ENST00000481812 FARP2O94887 1054 aaPredicted RBP23.4■■□□□ 1.34
VPS16-207ENST00000481812 RARBP10826 455 aa23.4■■□□□ 1.34
VPS16-207ENST00000481812 KRT76Q01546 638 aa23.4■■□□□ 1.34
VPS16-207ENST00000481812 ARHGAP1Q07960 439 aa23.4■■□□□ 1.34
VPS16-207ENST00000481812 FOXD4L6Q3SYB3 417 aaPredicted RBP23.4■■□□□ 1.34
VPS16-207ENST00000481812 B3GNT9Q6UX72 402 aa23.4■■□□□ 1.34
VPS16-207ENST00000481812 FOXD4L3Q6VB84 417 aaPredicted RBP23.4■■□□□ 1.34
VPS16-207ENST00000481812 FTOQ9C0B1 505 aaKnown RBP eCLIP23.4■■□□□ 1.34
VPS16-207ENST00000481812 SCAND2PQ9GZW5 306 aaPredicted RBP23.4■■□□□ 1.34
VPS16-207ENST00000481812 MLXIPQ9HAP2 919 aa23.4■■□□□ 1.34
VPS16-207ENST00000481812 SLC9A2Q9UBY0 812 aa23.4■■□□□ 1.34
VPS16-207ENST00000481812 FRMPD3Q5JV73 1810 aa23.4■■□□□ 1.34
VPS16-207ENST00000481812 PPP6R2O75170 966 aa23.39■■□□□ 1.33
VPS16-207ENST00000481812 FXR2P51116 673 aaKnown RBP eCLIP23.39■■□□□ 1.33
VPS16-207ENST00000481812 GJA9P57773 515 aa23.39■■□□□ 1.33
VPS16-207ENST00000481812 PPP2R5CQ13362 524 aa23.39■■□□□ 1.33
VPS16-207ENST00000481812 STK38Q15208 465 aa23.39■■□□□ 1.33
VPS16-207ENST00000481812 TMEM63BQ5T3F8 832 aa23.39■■□□□ 1.33
VPS16-207ENST00000481812 ZNF746Q6NUN9 644 aaPredicted RBP23.39■■□□□ 1.33
VPS16-207ENST00000481812 CYFIP1Q7L576 1253 aa23.39■■□□□ 1.33
VPS16-207ENST00000481812 COPS5Q92905 334 aa23.39■■□□□ 1.33
VPS16-207ENST00000481812 TNPO1Q92973 898 aaKnown RBP23.39■■□□□ 1.33
VPS16-207ENST00000481812 FERMT2Q96AC1 680 aa23.39■■□□□ 1.33
VPS16-207ENST00000481812 UNC93B1Q9H1C4 597 aa23.39■■□□□ 1.33
VPS16-207ENST00000481812 UPF3AQ9H1J1 476 aaKnown RBP23.39■■□□□ 1.33
VPS16-207ENST00000481812 TTC12Q9H892 705 aaPredicted RBP23.39■■□□□ 1.33
VPS16-207ENST00000481812 JPH1Q9HDC5 661 aaPredicted RBP23.39■■□□□ 1.33
VPS16-207ENST00000481812 TCEAL9Q9UHQ7 104 aa23.39■■□□□ 1.33
VPS16-207ENST00000481812 CCL5P13501 91 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 CAPN2P17655 700 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 TXKP42681 527 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 CEBPZQ03701 1054 aaKnown RBP23.38■■□□□ 1.33
VPS16-207ENST00000481812 PDIA5Q14554 519 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 TMEM266Q2M3C6 531 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 LHX8Q68G74 356 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 DTHD1Q6ZMT9 781 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 CLEC17AQ6ZS10 378 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 TLK2Q86UE8 772 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 RDM1Q8NG50 284 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 KCNG4Q8TDN1 519 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 AP5M1Q9H0R1 490 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 PKD2L1Q9P0L9 805 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 VAV3Q9UKW4 847 aa23.38■■□□□ 1.33
VPS16-207ENST00000481812 WDR81Q562E7 1941 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 SPTLC2O15270 562 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 DYNC1LI2O43237 492 aaPredicted RBP23.37■■□□□ 1.33
VPS16-207ENST00000481812 ATG7O95352 703 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 SPIRE1Q08AE8 756 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 MTFR1Q15390 333 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 GJC2Q5T442 439 aaPredicted RBP23.37■■□□□ 1.33
VPS16-207ENST00000481812 SMAP1Q8IYB5 467 aaPredicted RBP23.37■■□□□ 1.33
VPS16-207ENST00000481812 OR6J1Q8NGC5 347 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 PPTC7Q8NI37 304 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 RAB34Q9BZG1 259 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 BCAS3Q9H6U6 928 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 SPC25Q9HBM1 224 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 SRPRBQ9Y5M8 271 aaKnown RBP23.37■■□□□ 1.33
VPS16-207ENST00000481812 CENPFP49454 3210 aa23.37■■□□□ 1.33
VPS16-207ENST00000481812 ELP1O95163 1332 aa23.36■■□□□ 1.33
VPS16-207ENST00000481812 A6NJR5 290 aa23.36■■□□□ 1.33
VPS16-207ENST00000481812 HOXD8P13378 290 aaPredicted RBP23.36■■□□□ 1.33
VPS16-207ENST00000481812 SFNP31947 248 aa23.36■■□□□ 1.33
VPS16-207ENST00000481812 IGSF22Q8N9C0 903 aa23.36■■□□□ 1.33
VPS16-207ENST00000481812 LEO1Q8WVC0 666 aaPredicted RBP23.36■■□□□ 1.33
VPS16-207ENST00000481812 GJA10Q969M2 543 aa23.36■■□□□ 1.33
VPS16-207ENST00000481812 SPATA33Q96N06 139 aa23.36■■□□□ 1.33
VPS16-207ENST00000481812 RNF208Q9H0X6 261 aa23.36■■□□□ 1.33
VPS16-207ENST00000481812 UNC45AQ9H3U1 944 aa23.36■■□□□ 1.33
VPS16-207ENST00000481812 POTEFA5A3E0 1075 aa23.35■■□□□ 1.33
VPS16-207ENST00000481812 NCLP19338 710 aaKnown RBP23.35■■□□□ 1.33
VPS16-207ENST00000481812 CST5P28325 142 aaPredicted RBP23.35■■□□□ 1.33
VPS16-207ENST00000481812 JAK3P52333 1124 aa23.35■■□□□ 1.33
VPS16-207ENST00000481812 HSDL1Q3SXM5 330 aa23.35■■□□□ 1.33
VPS16-207ENST00000481812 BRDTQ58F21 947 aaPredicted RBP23.35■■□□□ 1.33
VPS16-207ENST00000481812 SEPT1Q8WYJ6 367 aa23.35■■□□□ 1.33
VPS16-207ENST00000481812 SPATA32Q96LK8 384 aa23.35■■□□□ 1.33
VPS16-207ENST00000481812 UIMC1Q96RL1 719 aa23.35■■□□□ 1.33
VPS16-207ENST00000481812 XPNPEP3Q9NQH7 507 aa23.35■■□□□ 1.33
VPS16-207ENST00000481812 FBXO2Q9UK22 296 aaPredicted RBP23.35■■□□□ 1.33
VPS16-207ENST00000481812 STK24Q9Y6E0 443 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms