RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 NFX1Q12986 1120 aaKnown RBP4.84□□□□□ -1.63
VPS13D-208ENST00000481484 NMIQ13287 307 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-208ENST00000481484 SART3Q15020 963 aaKnown RBP4.84□□□□□ -1.63
VPS13D-208ENST00000481484 KCNA10Q16322 511 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 DUSP28Q4G0W2 176 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 GNASQ5JWF2 1037 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 PRAMEF19Q5SWL8 479 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 ANO1Q5XXA6 986 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 NSMFQ6X4W1 530 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 RNF207Q6ZRF8 634 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 KCTD1Q719H9 257 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 NOL8Q76FK4 1167 aaKnown RBP4.84□□□□□ -1.63
VPS13D-208ENST00000481484 CHD1LQ86WJ1 897 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 MCF2L2Q86YR7 1114 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 TBC1D10CQ8IV04 446 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 FBXO16Q8IX29 292 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-208ENST00000481484 STK11IPQ8N1F8 1099 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 SLC43A3Q8NBI5 491 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 PNMA1Q8ND90 353 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 BANK1Q8NDB2 785 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 RUFY2Q8WXA3 655 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 BADQ92934 168 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 FERMT2Q96AC1 680 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 TRIM43Q96BQ3 446 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-208ENST00000481484 LENG1Q96BZ8 264 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-208ENST00000481484 FAM227BQ96M60 508 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 AGBL1Q96MI9 1066 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 TMEM47Q9BQJ4 181 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 UBAC1Q9BSL1 405 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 LNPKQ9C0E8 428 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 KAT14Q9H8E8 782 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 ZFAND3Q9H8U3 227 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 IL17RBQ9NRM6 502 aa4.84□□□□□ -1.63
VPS13D-208ENST00000481484 PTPRSQ13332 1948 aa4.84□□□□□ -1.64
VPS13D-208ENST00000481484 TNKSO95271 1327 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 RBM47A0AV96 593 aaKnown RBP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 PTPDC1A2A3K4 754 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 ZNF213O14771 459 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 CD4P01730 458 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 ACTN1P12814 892 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 FOSL2P15408 326 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 SDSP20132 328 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 FSHRP23945 695 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 CDK7P50613 346 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 CNTN2Q02246 1040 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 GHRHRQ02643 423 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 FAAP100Q0VG06 881 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 TRDNQ13061 729 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 ITGA7Q13683 1181 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 TTLL4Q14679 1199 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 SHHQ15465 462 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 CDC37Q16543 378 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 RRP12Q5JTH9 1297 aaKnown RBP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 RASIP1Q5U651 963 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 VPS53Q5VIR6 699 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 NFRKBQ6P4R8 1299 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 KCNV1Q6PIU1 500 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 SLC30A10Q6XR72 485 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 ZNF589Q86UQ0 364 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 TEX2Q8IWB9 1127 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 CCDC116Q8IYX3 515 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 RPUSD2Q8IZ73 545 aaKnown RBP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 MAFAQ8NHW3 353 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 CAGE1Q8TC20 777 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 ADAM32Q8TC27 787 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 ANKS1AQ92625 1134 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 RILPL2Q969X0 211 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 GUCD1Q96NT3 240 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 KCTD15Q96SI1 283 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 IWS1Q96ST2 819 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 MTA3Q9BTC8 594 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 KATNAL1Q9BW62 490 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 HIPK3Q9H422 1215 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 IL23AQ9NPF7 189 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 MAP3K20Q9NYL2 800 aaKnown RBP4.83□□□□□ -1.64
VPS13D-208ENST00000481484 REV3LO60673 3130 aa4.83□□□□□ -1.64
VPS13D-208ENST00000481484 MYH9P35579 1960 aaKnown RBP4.82□□□□□ -1.64
VPS13D-208ENST00000481484 DOCK5Q9H7D0 1870 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 ASTN1O14525 1302 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 FRMPD2Q68DX3 1309 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-208ENST00000481484 ERICH2A1L162 156 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 MYADML2A6NDP7 307 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 NFIBO00712 420 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 TERTO14746 1132 aaKnown RBP4.82□□□□□ -1.64
VPS13D-208ENST00000481484 CTAGE5O15320 804 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 ADCY6O43306 1168 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 NMT2O60551 498 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 EFCAB14O75071 495 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 WFS1O76024 890 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 BAIAP3O94812 1187 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 PARP1P09874 1014 aaKnown RBP4.82□□□□□ -1.64
VPS13D-208ENST00000481484 HAND2P61296 217 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 RPS6P62753 249 aaKnown RBP4.82□□□□□ -1.64
VPS13D-208ENST00000481484 RBL2Q08999 1139 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 BFSP2Q13515 415 aa4.82□□□□□ -1.64
VPS13D-208ENST00000481484 BAATQ14032 418 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-208ENST00000481484 MUM1L1Q5H9M0 696 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms