RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 TSPYL2Q9H2G4 693 aaPredicted RBP21.73■■□□□ 1.07
ABCF3-214ENST00000480562 TUT1Q9H6E5 874 aaKnown RBP21.73■■□□□ 1.07
ABCF3-214ENST00000480562 TELO2Q9Y4R8 837 aa21.73■■□□□ 1.07
ABCF3-214ENST00000480562 ABHD14A-ACY1A0A1B0GW23 586 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 C17orf102A2RUQ5 167 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 CCDC69A6NI79 296 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 SLC27A2O14975 620 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 STAM2O75886 525 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 SMIM10L2AP0DMW4 78 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 SMIM10L2BP0DMW5 78 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 POU3F3P20264 500 aaPredicted RBP21.72■■□□□ 1.07
ABCF3-214ENST00000480562 NEDD9Q14511 834 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 SRBD1Q8N5C6 995 aaKnown RBP21.72■■□□□ 1.07
ABCF3-214ENST00000480562 CUL5Q93034 780 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 ATP6V0A1Q93050 837 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 ESYT1Q9BSJ8 1104 aa21.72■■□□□ 1.07
ABCF3-214ENST00000480562 SEC63Q9UGP8 760 aaKnown RBP21.72■■□□□ 1.07
ABCF3-214ENST00000480562 TNFRSF10AO00220 468 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 MEIS2O14770 477 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 FIBPO43427 364 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 SMARCA1P28370 1054 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 TFF2Q03403 129 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 IKBKEQ14164 716 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 FAM117BQ6P1L5 589 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 METTL7BQ6UX53 244 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 ADAMTS19Q8TE59 1207 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 GPR20Q99678 358 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 LZTS2Q9BRK4 669 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 LRRC2Q9BYS8 371 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 DOCK5Q9H7D0 1870 aa21.71■■□□□ 1.07
ABCF3-214ENST00000480562 hCG_1642624A0A1W2PR95 340 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 RSPH10B2B2RC85 870 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 PIK3CDO00329 1044 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 TREHO43280 583 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 LGR5O75473 907 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 RSPH10BP0C881 870 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 GNAQP50148 359 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 SP4Q02446 784 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 GRB10Q13322 594 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 UTP14CQ5TAP6 766 aaKnown RBP21.7■■□□□ 1.06
ABCF3-214ENST00000480562 PCNX4Q63HM2 1172 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 CREB3L3Q68CJ9 461 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 TRIM50Q86XT4 487 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 TMEM87BQ96K49 555 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 MTA3Q9BTC8 594 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 USP26Q9BXU7 913 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 RNPEPQ9H4A4 650 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 MUC3AQ02505 3323 aa21.7■■□□□ 1.06
ABCF3-214ENST00000480562 GJB5O95377 273 aa21.69■■□□□ 1.06
ABCF3-214ENST00000480562 HOXC8P31273 242 aa21.69■■□□□ 1.06
ABCF3-214ENST00000480562 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.69■■□□□ 1.06
ABCF3-214ENST00000480562 SKAP1Q86WV1 359 aa21.69■■□□□ 1.06
ABCF3-214ENST00000480562 TMTC2Q8N394 836 aa21.69■■□□□ 1.06
ABCF3-214ENST00000480562 CCDC82Q8N4S0 544 aa21.69■■□□□ 1.06
ABCF3-214ENST00000480562 IL27Q8NEV9 243 aa21.69■■□□□ 1.06
ABCF3-214ENST00000480562 DBF4BQ8NFT6 615 aa21.69■■□□□ 1.06
ABCF3-214ENST00000480562 RAD9AQ99638 391 aa21.69■■□□□ 1.06
ABCF3-214ENST00000480562 SETD4Q9NVD3 440 aa21.69■■□□□ 1.06
ABCF3-214ENST00000480562 LPXNO60711 386 aa21.68■■□□□ 1.06
ABCF3-214ENST00000480562 EFCAB14O75071 495 aa21.68■■□□□ 1.06
ABCF3-214ENST00000480562 NECTIN1Q15223 517 aa21.68■■□□□ 1.06
ABCF3-214ENST00000480562 UHRF1Q96T88 793 aaPredicted RBP21.68■■□□□ 1.06
ABCF3-214ENST00000480562 OSBPL7Q9BZF2 842 aa21.68■■□□□ 1.06
ABCF3-214ENST00000480562 ANO2Q9NQ90 1003 aa21.68■■□□□ 1.06
ABCF3-214ENST00000480562 MTUS1Q9ULD2 1270 aa21.68■■□□□ 1.06
ABCF3-214ENST00000480562 EMSYQ7Z589 1322 aa21.68■■□□□ 1.06
ABCF3-214ENST00000480562 XIRP2A4UGR9 3374 aa21.67■■□□□ 1.06
ABCF3-214ENST00000480562 CTSHP09668 335 aa21.67■■□□□ 1.06
ABCF3-214ENST00000480562 LIFRP42702 1097 aa21.67■■□□□ 1.06
ABCF3-214ENST00000480562 UBE2SQ16763 222 aa21.67■■□□□ 1.06
ABCF3-214ENST00000480562 XRRA1Q6P2D8 792 aa21.67■■□□□ 1.06
ABCF3-214ENST00000480562 NLRX1Q86UT6 975 aa21.67■■□□□ 1.06
ABCF3-214ENST00000480562 NECAB3Q96P71 396 aaPredicted RBP21.67■■□□□ 1.06
ABCF3-214ENST00000480562 PSTPIP2Q9H939 334 aa21.67■■□□□ 1.06
ABCF3-214ENST00000480562 SLC12A7Q9Y666 1083 aa21.67■■□□□ 1.06
ABCF3-214ENST00000480562 CALM1P0DP23 149 aa21.66■■□□□ 1.06
ABCF3-214ENST00000480562 CALM2P0DP24 149 aa21.66■■□□□ 1.06
ABCF3-214ENST00000480562 CALM3P0DP25 149 aa21.66■■□□□ 1.06
ABCF3-214ENST00000480562 KCNQ1P51787 676 aa21.66■■□□□ 1.06
ABCF3-214ENST00000480562 PLEKHG4Q58EX7 1191 aa21.66■■□□□ 1.06
ABCF3-214ENST00000480562 GDPD5Q8WTR4 605 aa21.66■■□□□ 1.06
ABCF3-214ENST00000480562 SENP7Q9BQF6 1050 aa21.66■■□□□ 1.06
ABCF3-214ENST00000480562 COL4A4P53420 1690 aaPredicted RBP21.66■■□□□ 1.06
ABCF3-214ENST00000480562 TCF20Q9UGU0 1960 aaKnown RBP21.65■■□□□ 1.06
ABCF3-214ENST00000480562 LINC01553A4QN01 128 aa21.65■■□□□ 1.06
ABCF3-214ENST00000480562 ATP9AO75110 1047 aa21.65■■□□□ 1.06
ABCF3-214ENST00000480562 BMP1P13497 986 aa21.65■■□□□ 1.06
ABCF3-214ENST00000480562 MKRN4PQ13434 485 aaPredicted RBP21.65■■□□□ 1.06
ABCF3-214ENST00000480562 TMTC3Q6ZXV5 915 aa21.65■■□□□ 1.06
ABCF3-214ENST00000480562 MICU3Q86XE3 530 aa21.65■■□□□ 1.06
ABCF3-214ENST00000480562 MYOCDQ8IZQ8 938 aa21.65■■□□□ 1.06
ABCF3-214ENST00000480562 FANCBQ8NB91 859 aa21.65■■□□□ 1.06
ABCF3-214ENST00000480562 PKD2L1Q9P0L9 805 aa21.65■■□□□ 1.06
ABCF3-214ENST00000480562 ZNF215Q9UL58 517 aaPredicted RBP21.65■■□□□ 1.06
ABCF3-214ENST00000480562 AMHP03971 560 aa21.64■■□□□ 1.05
ABCF3-214ENST00000480562 GNAT1P11488 350 aa21.64■■□□□ 1.05
ABCF3-214ENST00000480562 ITGB5P18084 799 aa21.64■■□□□ 1.05
ABCF3-214ENST00000480562 ERVK-21P61565 698 aa21.64■■□□□ 1.05
ABCF3-214ENST00000480562 ARHGAP4P98171 946 aa21.64■■□□□ 1.05
ABCF3-214ENST00000480562 LMBR1Q8WVP7 490 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms