RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 EPB41L4AQ9HCS5 686 aaPredicted RBP3.93□□□□□ -1.78
ATRX-205ENST00000479487 HSPBP1Q9NZL4 362 aa3.93□□□□□ -1.78
ATRX-205ENST00000479487 NOP58Q9Y2X3 529 aaKnown RBP3.93□□□□□ -1.78
ATRX-205ENST00000479487 PMF1-BGLAPU3KQ54 211 aa3.93□□□□□ -1.78
ATRX-205ENST00000479487 CLIP1P30622 1438 aa3.93□□□□□ -1.78
ATRX-205ENST00000479487 RRBP1Q9P2E9 1410 aaKnown RBP3.93□□□□□ -1.78
ATRX-205ENST00000479487 OVOL3O00110 214 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 AQP7O14520 342 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 SGSM2O43147 1006 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 EIF5BO60841 1220 aaKnown RBP3.92□□□□□ -1.78
ATRX-205ENST00000479487 NTRK1P04629 796 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 FPR2P25090 351 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 GJA9P57773 515 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 HTRA3P83110 453 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 FOXO4P98177 505 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 ZNF200P98182 395 aaPredicted RBP3.92□□□□□ -1.78
ATRX-205ENST00000479487 NFKB2Q00653 900 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 FOXB2Q5VYV0 432 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 USP53Q70EK8 1073 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 CEP68Q76N32 757 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 IFNL3Q8IZI9 196 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 SYT8Q8NBV8 401 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 GSTCDQ8NEC7 633 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 PMFBP1Q8TBY8 1022 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.92□□□□□ -1.78
ATRX-205ENST00000479487 TRMT2BQ96GJ1 504 aaKnown RBP3.92□□□□□ -1.78
ATRX-205ENST00000479487 PHF20Q9BVI0 1012 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 LNPKQ9C0E8 428 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 AP5M1Q9H0R1 490 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 PFDN2Q9UHV9 154 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 MRPS23Q9Y3D9 190 aaKnown RBP3.92□□□□□ -1.78
ATRX-205ENST00000479487 PCDHA2Q9Y5H9 948 aa3.92□□□□□ -1.78
ATRX-205ENST00000479487 POLR1AO95602 1720 aaPredicted RBP3.92□□□□□ -1.78
ATRX-205ENST00000479487 MAPKBP1O60336 1514 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 ERICH3Q5RHP9 1530 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 CCDC85CA6NKD9 419 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 ARVCFO00192 962 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 MSCO60682 206 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 EFCAB14O75071 495 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 ASGR2P07307 311 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 INSRRP14616 1297 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 CACNB2Q08289 660 aaPredicted RBP3.91□□□□□ -1.78
ATRX-205ENST00000479487 KIAA2012Q0VF49 1180 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 FAM209AQ5JX71 171 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 ASXL2Q76L83 1435 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 B3GNT8Q7Z7M8 397 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 SAPCD2Q86UD0 394 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 SYNPOQ8N3V7 929 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 LILRB2Q8N423 598 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 TTLL11Q8NHH1 800 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 USP33Q8TEY7 942 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 CDC6Q99741 560 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 MRPL4Q9BYD3 311 aaKnown RBP3.91□□□□□ -1.78
ATRX-205ENST00000479487 SLC6A20Q9NP91 592 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 NGRNQ9NPE2 291 aaKnown RBP3.91□□□□□ -1.78
ATRX-205ENST00000479487 COA3Q9Y2R0 106 aaPredicted RBP3.91□□□□□ -1.78
ATRX-205ENST00000479487 HCFC2Q9Y5Z7 792 aa3.91□□□□□ -1.78
ATRX-205ENST00000479487 SH3D21A4FU49 640 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 FFAR3O14843 346 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 HGSO14964 777 aaPredicted RBP3.9□□□□□ -1.79
ATRX-205ENST00000479487 MAFKO60675 156 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 DGKIO75912 1065 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 GRK2P25098 689 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 PMLP29590 882 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 GRK3P35626 688 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 MAGEA10P43363 369 aaPredicted RBP3.9□□□□□ -1.79
ATRX-205ENST00000479487 NCKAP1LP55160 1127 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 PUM1Q14671 1186 aaKnown RBP eCLIP3.9□□□□□ -1.79
ATRX-205ENST00000479487 RTP5Q14D33 572 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 CCDC144BQ3MJ40 725 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 NT5DC1Q5TFE4 455 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 KCNT2Q6UVM3 1135 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 LIPIQ6XZB0 460 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 FAM126BQ8IXS8 530 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 UHMK1Q8TAS1 419 aaKnown RBP3.9□□□□□ -1.79
ATRX-205ENST00000479487 FNIP1Q8TF40 1166 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 ALG3Q92685 438 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 MRFAP1L1Q96HT8 127 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 PKNOX2Q96KN3 472 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 IPO9Q96P70 1041 aaKnown RBP3.9□□□□□ -1.79
ATRX-205ENST00000479487 ADAM7Q9H2U9 754 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 SMOC1Q9H4F8 434 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 TMEM260Q9NX78 707 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 CLDND1Q9NY35 253 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 NTMQ9P121 344 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 PTCH2Q9Y6C5 1203 aa3.9□□□□□ -1.79
ATRX-205ENST00000479487 SOGA1O94964 1423 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 WDR97A6NE52 1622 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 SMARCA4P51532 1647 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 KRIT1O00522 736 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 SOD2P04179 222 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 ATF2P15336 505 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 ANP32AP39687 249 aaKnown RBP3.89□□□□□ -1.79
ATRX-205ENST00000479487 EPHA5P54756 1037 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 BMS1Q14692 1282 aaKnown RBP3.89□□□□□ -1.79
ATRX-205ENST00000479487 GLIPR1L2Q4G1C9 344 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 STEAP3Q658P3 488 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 HHIPL2Q6UWX4 724 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 ETV3LQ6ZN32 361 aa3.89□□□□□ -1.79
ATRX-205ENST00000479487 OTOP3Q7RTS5 596 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms