RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 AEBP2Q6ZN18 517 aaPredicted RBP17.64■□□□□ 0.41
ATRX-205ENST00000479487 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
ATRX-205ENST00000479487 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
ATRX-205ENST00000479487 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
ATRX-205ENST00000479487 POTEDQ86YR6 584 aa14.7□□□□□ -0.06
ATRX-205ENST00000479487 FOXD1Q16676 465 aa14.26□□□□□ -0.13
ATRX-205ENST00000479487 MSH5O43196 834 aa13.75□□□□□ -0.21
ATRX-205ENST00000479487 PIAS4Q8N2W9 510 aaPredicted RBP13.17□□□□□ -0.3
ATRX-205ENST00000479487 PPP6R1Q9UPN7 881 aa12.69□□□□□ -0.38
ATRX-205ENST00000479487 ADRA2BP18089 450 aa12.62□□□□□ -0.39
ATRX-205ENST00000479487 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
ATRX-205ENST00000479487 CACNB1Q02641 598 aaPredicted RBP12.25□□□□□ -0.45
ATRX-205ENST00000479487 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
ATRX-205ENST00000479487 MAPK8IP2Q13387 824 aaPredicted RBP11.81□□□□□ -0.52
ATRX-205ENST00000479487 SCAF1Q9H7N4 1312 aaKnown RBP11.67□□□□□ -0.54
ATRX-205ENST00000479487 RNF39Q9H2S5 420 aa11.61□□□□□ -0.55
ATRX-205ENST00000479487 DCAF8L1A6NGE4 600 aa11.5□□□□□ -0.57
ATRX-205ENST00000479487 C1QBPQ07021 282 aaKnown RBP11.44□□□□□ -0.58
ATRX-205ENST00000479487 POTEHQ6S545 545 aa11.38□□□□□ -0.59
ATRX-205ENST00000479487 HOXD11P31277 338 aaPredicted RBP11.22□□□□□ -0.61
ATRX-205ENST00000479487 DNAJC5BQ9UF47 199 aa11.06□□□□□ -0.64
ATRX-205ENST00000479487 RNF216Q9NWF9 866 aaPredicted RBP10.94□□□□□ -0.66
ATRX-205ENST00000479487 PPP4R3CPQ6ZMV5 832 aa10.92□□□□□ -0.66
ATRX-205ENST00000479487 CNKSR2Q8WXI2 1034 aa10.83□□□□□ -0.68
ATRX-205ENST00000479487 NCBP3Q53F19 620 aaKnown RBP10.69□□□□□ -0.7
ATRX-205ENST00000479487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.7
ATRX-205ENST00000479487 DSG3P32926 999 aa10.6□□□□□ -0.71
ATRX-205ENST00000479487 CAPN15O75808 1086 aa10.48□□□□□ -0.73
ATRX-205ENST00000479487 SPINK5Q9NQ38 1064 aaPredicted RBP10.41□□□□□ -0.74
ATRX-205ENST00000479487 U3KPZ7 1027 aaPredicted RBP10.34□□□□□ -0.75
ATRX-205ENST00000479487 NPM3O75607 178 aaKnown RBP10.3□□□□□ -0.76
ATRX-205ENST00000479487 SP7Q8TDD2 431 aaPredicted RBP10.3□□□□□ -0.76
ATRX-205ENST00000479487 CHRDL2Q6WN34 429 aa10.24□□□□□ -0.77
ATRX-205ENST00000479487 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
ATRX-205ENST00000479487 ABCB7O75027 752 aa10.12□□□□□ -0.79
ATRX-205ENST00000479487 ZNF219Q9P2Y4 722 aaPredicted RBP10.12□□□□□ -0.79
ATRX-205ENST00000479487 TRHP20396 242 aaPredicted RBP10.1□□□□□ -0.79
ATRX-205ENST00000479487 APLP2Q06481 763 aa10.1□□□□□ -0.79
ATRX-205ENST00000479487 KCNA4P22459 653 aa10.07□□□□□ -0.8
ATRX-205ENST00000479487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.93□□□□□ -0.82
ATRX-205ENST00000479487 HNRNPUL2Q1KMD3 747 aaKnown RBP9.93□□□□□ -0.82
ATRX-205ENST00000479487 HAX1O00165 279 aa9.86□□□□□ -0.83
ATRX-205ENST00000479487 SAMD1Q6SPF0 538 aaPredicted RBP9.81□□□□□ -0.84
ATRX-205ENST00000479487 PIP4P2Q8N4L2 257 aa9.8□□□□□ -0.84
ATRX-205ENST00000479487 SLC4A2P04920 1241 aa9.78□□□□□ -0.84
ATRX-205ENST00000479487 AKT1S1Q96B36 256 aa9.78□□□□□ -0.84
ATRX-205ENST00000479487 PLSCR2Q9NRY7 297 aa9.69□□□□□ -0.86
ATRX-205ENST00000479487 POLA2Q14181 598 aa9.65□□□□□ -0.86
ATRX-205ENST00000479487 LHX8Q68G74 356 aa9.65□□□□□ -0.86
ATRX-205ENST00000479487 MYCNP04198 464 aaPredicted RBP9.64□□□□□ -0.87
ATRX-205ENST00000479487 REM2Q8IYK8 340 aaPredicted RBP9.64□□□□□ -0.87
ATRX-205ENST00000479487 FXR2P51116 673 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATRX-205ENST00000479487 SLC4A1APQ9BWU0 796 aaKnown RBP9.62□□□□□ -0.87
ATRX-205ENST00000479487 EVX2Q03828 476 aa9.6□□□□□ -0.87
ATRX-205ENST00000479487 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
ATRX-205ENST00000479487 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
ATRX-205ENST00000479487 ZBTB12Q9Y330 459 aaPredicted RBP9.48□□□□□ -0.89
ATRX-205ENST00000479487 GABBR2O75899 941 aa9.41□□□□□ -0.9
ATRX-205ENST00000479487 C19orf67A6NJJ6 358 aa9.36□□□□□ -0.91
ATRX-205ENST00000479487 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
ATRX-205ENST00000479487 ATXN8OSP0DMR3 200 aa9.31□□□□□ -0.92
ATRX-205ENST00000479487 PRKAR2AP13861 404 aaKnown RBP9.29□□□□□ -0.92
ATRX-205ENST00000479487 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
ATRX-205ENST00000479487 ZBTB22O15209 634 aa9.19□□□□□ -0.94
ATRX-205ENST00000479487 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
ATRX-205ENST00000479487 FBLN2P98095 1184 aa9.15□□□□□ -0.94
ATRX-205ENST00000479487 POTEMA6NI47 508 aa9.13□□□□□ -0.95
ATRX-205ENST00000479487 SPDYE1Q8NFV5 336 aaPredicted RBP9.13□□□□□ -0.95
ATRX-205ENST00000479487 CSRNP3Q8WYN3 585 aa9.13□□□□□ -0.95
ATRX-205ENST00000479487 CLCN6P51797 869 aa9.11□□□□□ -0.95
ATRX-205ENST00000479487 EHMT2Q96KQ7 1210 aa9.11□□□□□ -0.95
ATRX-205ENST00000479487 CLEC11AQ9Y240 323 aa9.11□□□□□ -0.95
ATRX-205ENST00000479487 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
ATRX-205ENST00000479487 SPDYE2BA6NHP3 402 aa9.09□□□□□ -0.95
ATRX-205ENST00000479487 SPDYE6P0CI01 402 aa9.09□□□□□ -0.95
ATRX-205ENST00000479487 SPDYE2Q495Y8 402 aa9.09□□□□□ -0.95
ATRX-205ENST00000479487 POTEGQ6S5H5 508 aa9.06□□□□□ -0.96
ATRX-205ENST00000479487 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.97
ATRX-205ENST00000479487 OTUD5Q96G74 571 aa9□□□□□ -0.97
ATRX-205ENST00000479487 CHADLQ6NUI6 762 aa8.98□□□□□ -0.97
ATRX-205ENST00000479487 CD44P16070 742 aaKnown RBP8.96□□□□□ -0.98
ATRX-205ENST00000479487 ZNF692Q9BU19 519 aaPredicted RBP8.91□□□□□ -0.98
ATRX-205ENST00000479487 PRR29P0C7W0 189 aa8.87□□□□□ -0.99
ATRX-205ENST00000479487 SSUH2Q9Y2M2 353 aa8.84□□□□□ -0.99
ATRX-205ENST00000479487 POTEB2H3BUK9 544 aa8.83□□□□□ -1
ATRX-205ENST00000479487 FARP1Q9Y4F1 1045 aaPredicted RBP8.81□□□□□ -1
ATRX-205ENST00000479487 MKRN4PQ13434 485 aaPredicted RBP8.8□□□□□ -1
ATRX-205ENST00000479487 ZNF579Q8NAF0 562 aaKnown RBP8.8□□□□□ -1
ATRX-205ENST00000479487 PABPN1Q86U42 306 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATRX-205ENST00000479487 GALR2O43603 387 aaPredicted RBP8.7□□□□□ -1.02
ATRX-205ENST00000479487 ZRANB1Q9UGI0 708 aa8.7□□□□□ -1.02
ATRX-205ENST00000479487 MAMSTRQ6ZN01 415 aa8.69□□□□□ -1.02
ATRX-205ENST00000479487 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
ATRX-205ENST00000479487 FAM163AQ96GL9 167 aaPredicted RBP8.66□□□□□ -1.02
ATRX-205ENST00000479487 STAG3Q9UJ98 1225 aa8.66□□□□□ -1.02
ATRX-205ENST00000479487 CDAN1Q8IWY9 1227 aa8.58□□□□□ -1.04
ATRX-205ENST00000479487 PELP1Q8IZL8 1130 aaKnown RBP8.58□□□□□ -1.04
ATRX-205ENST00000479487 METRNQ9UJH8 293 aa8.58□□□□□ -1.04
ATRX-205ENST00000479487 SLC39A7Q92504 469 aa8.57□□□□□ -1.04
ATRX-205ENST00000479487 SCUBE2Q9NQ36 999 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms