RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 HOXC8P31273 242 aa12.79□□□□□ -0.36
HDLBP-237ENST00000479169 TCEAL5Q5H9L2 206 aa12.79□□□□□ -0.36
HDLBP-237ENST00000479169 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
HDLBP-237ENST00000479169 FCHSD1Q86WN1 690 aa12.79□□□□□ -0.36
HDLBP-237ENST00000479169 HOMER1Q86YM7 354 aa12.79□□□□□ -0.36
HDLBP-237ENST00000479169 YME1L1Q96TA2 773 aa12.79□□□□□ -0.36
HDLBP-237ENST00000479169 MLXIPQ9HAP2 919 aa12.79□□□□□ -0.36
HDLBP-237ENST00000479169 DIAPH3Q9NSV4 1193 aa12.79□□□□□ -0.36
HDLBP-237ENST00000479169 MAD2L2Q9UI95 211 aa12.79□□□□□ -0.36
HDLBP-237ENST00000479169 PCDHA1Q9Y5I3 950 aa12.79□□□□□ -0.36
HDLBP-237ENST00000479169 LOXHD1Q8IVV2 1947 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 COL4A6Q14031 1691 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-237ENST00000479169 H3BRB1 525 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 ZBTB5O15062 677 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 NT5C2P49902 561 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 GPM6BQ13491 265 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 SEC23AQ15436 765 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 PTPROQ16827 1216 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 IMMTQ16891 758 aaKnown RBP12.78□□□□□ -0.36
HDLBP-237ENST00000479169 TIGD5Q53EQ6 642 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 KCNV1Q6PIU1 500 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 TRIM50Q86XT4 487 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 PLEKHM2Q8IWE5 1019 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 TMEM192Q8IY95 271 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 BANK1Q8NDB2 785 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 NEK9Q8TD19 979 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 SEPT8Q92599 483 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 TOP1MTQ969P6 601 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 UIMC1Q96RL1 719 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 DSCC1Q9BVC3 393 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 KRT23Q9C075 422 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 RNPEPQ9H4A4 650 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 TUT1Q9H6E5 874 aaKnown RBP12.78□□□□□ -0.36
HDLBP-237ENST00000479169 TELO2Q9Y4R8 837 aa12.78□□□□□ -0.36
HDLBP-237ENST00000479169 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-237ENST00000479169 PRR33A8MZF0 331 aa12.77□□□□□ -0.37
HDLBP-237ENST00000479169 H3BNC9 293 aa12.77□□□□□ -0.37
HDLBP-237ENST00000479169 GCOM1H8Y6P7 765 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-237ENST00000479169 POLR2MP0CAP2 368 aa12.77□□□□□ -0.37
HDLBP-237ENST00000479169 TGFB3P10600 412 aa12.77□□□□□ -0.37
HDLBP-237ENST00000479169 SAMD11Q96NU1 681 aa12.77□□□□□ -0.37
HDLBP-237ENST00000479169 PIGSQ96S52 555 aa12.77□□□□□ -0.37
HDLBP-237ENST00000479169 IL25Q9H293 177 aa12.77□□□□□ -0.37
HDLBP-237ENST00000479169 SETD4Q9NVD3 440 aa12.77□□□□□ -0.37
HDLBP-237ENST00000479169 CTNNA3Q9UI47 895 aa12.77□□□□□ -0.37
HDLBP-237ENST00000479169 SUPT16HQ9Y5B9 1047 aaKnown RBP12.77□□□□□ -0.37
HDLBP-237ENST00000479169 TTC3P53804 2025 aa12.77□□□□□ -0.37
HDLBP-237ENST00000479169 KIAA1671Q9BY89 1806 aa12.76□□□□□ -0.37
HDLBP-237ENST00000479169 NOP56O00567 594 aaKnown RBP12.76□□□□□ -0.37
HDLBP-237ENST00000479169 MRPS9P82933 396 aaKnown RBP12.76□□□□□ -0.37
HDLBP-237ENST00000479169 SEMA3FQ13275 785 aa12.76□□□□□ -0.37
HDLBP-237ENST00000479169 CYFIP1Q7L576 1253 aa12.76□□□□□ -0.37
HDLBP-237ENST00000479169 ALYREFQ86V81 257 aaKnown RBP12.76□□□□□ -0.37
HDLBP-237ENST00000479169 CHD1LQ86WJ1 897 aa12.76□□□□□ -0.37
HDLBP-237ENST00000479169 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
HDLBP-237ENST00000479169 PABPC5Q96DU9 382 aaKnown RBP12.76□□□□□ -0.37
HDLBP-237ENST00000479169 IFIH1Q9BYX4 1025 aaKnown RBP12.76□□□□□ -0.37
HDLBP-237ENST00000479169 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
HDLBP-237ENST00000479169 NSUN3Q9H649 340 aaKnown RBP12.76□□□□□ -0.37
HDLBP-237ENST00000479169 CNNM2Q9H8M5 875 aa12.76□□□□□ -0.37
HDLBP-237ENST00000479169 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
HDLBP-237ENST00000479169 MAP3K20Q9NYL2 800 aaKnown RBP12.76□□□□□ -0.37
HDLBP-237ENST00000479169 CYTH3O43739 400 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 TECTAO75443 2155 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 ALADP13716 330 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 CTNNB1P35222 781 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 SP4Q02446 784 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 ZP2Q05996 745 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 GRM4Q14833 912 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 COL19A1Q14993 1142 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 UTP14CQ5TAP6 766 aaKnown RBP12.75□□□□□ -0.37
HDLBP-237ENST00000479169 RPAINQ86UA6 219 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 PIBF1Q8WXW3 757 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 GPR20Q99678 358 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 RIOX1Q9H6W3 641 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 CLDND1Q9NY35 253 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 RTEL1Q9NZ71 1219 aa12.75□□□□□ -0.37
HDLBP-237ENST00000479169 FRMPD4Q14CM0 1322 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 DCXO43602 365 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 CAND2O75155 1236 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 CSPG5O95196 566 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 ADAM17P78536 824 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 ARHGAP4P98171 946 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 CLUL1Q15846 466 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
HDLBP-237ENST00000479169 GNPTABQ3T906 1256 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 METTL7BQ6UX53 244 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 SAMD3Q8N6K7 520 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 LMBR1Q8WVP7 490 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 INPP4AQ96PE3 977 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-237ENST00000479169 USP26Q9BXU7 913 aa12.74□□□□□ -0.37
HDLBP-237ENST00000479169 PNMA6FA0A0J9YX94 578 aa12.73□□□□□ -0.37
HDLBP-237ENST00000479169 POTEB3A0JP26 581 aa12.73□□□□□ -0.37
HDLBP-237ENST00000479169 SPATA31C2B4DYI2 1134 aa12.73□□□□□ -0.37
HDLBP-237ENST00000479169 HIP1O00291 1037 aa12.73□□□□□ -0.37
HDLBP-237ENST00000479169 GRM6O15303 877 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms