RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 CDC37Q16543 378 aaPredicted RBP16.38■□□□□ 0.21
U2AF1-210ENST00000478282 ARHGAP27Q6ZUM4 889 aa16.38■□□□□ 0.21
U2AF1-210ENST00000478282 ILDR2Q71H61 639 aa16.38■□□□□ 0.21
U2AF1-210ENST00000478282 JPH2Q9BR39 696 aaPredicted RBP16.38■□□□□ 0.21
U2AF1-210ENST00000478282 DRP2Q13474 957 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 SLC35G1Q2M3R5 365 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 CEP85LQ5SZL2 805 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 C6orf89Q6UWU4 347 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 MAATS1Q7Z4T9 603 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 MMTAG2Q9BU76 263 aaKnown RBP16.37■□□□□ 0.21
U2AF1-210ENST00000478282 TMBIM4Q9HC24 238 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 ATP8A2Q9NTI2 1148 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 LTBP1Q14766 1721 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 E7EVH7 732 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 CHUKO15111 745 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 FTCDO95954 541 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 DNA2P51530 1060 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 IFT88Q13099 833 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 NAB2Q15742 525 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 CCDC40Q4G0X9 1142 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 SBK1Q52WX2 424 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 TMED8Q6PL24 325 aaPredicted RBP16.37■□□□□ 0.21
U2AF1-210ENST00000478282 DGKHQ86XP1 1220 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 CCDC13Q8IYE1 715 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 GUF1Q8N442 669 aaKnown RBP16.37■□□□□ 0.21
U2AF1-210ENST00000478282 ARFGAP2Q8N6H7 521 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 NSUN4Q96CB9 384 aaKnown RBP16.37■□□□□ 0.21
U2AF1-210ENST00000478282 LUC7LQ9NQ29 371 aaKnown RBP16.37■□□□□ 0.21
U2AF1-210ENST00000478282 MAD2L2Q9UI95 211 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 LRRC63Q05C16 580 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 SLC9C1Q4G0N8 1177 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 MEI1Q5TIA1 1274 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 LRIG3Q6UXM1 1119 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 LRRC55Q6ZSA7 311 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 UNC13DQ70J99 1090 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.37■□□□□ 0.21
U2AF1-210ENST00000478282 PDGFDQ9GZP0 370 aaPredicted RBP16.37■□□□□ 0.21
U2AF1-210ENST00000478282 PLCB1Q9NQ66 1216 aa16.37■□□□□ 0.21
U2AF1-210ENST00000478282 GOLGA6L10A6NI86 522 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 CCNT1O60563 726 aaKnown RBP16.36■□□□□ 0.21
U2AF1-210ENST00000478282 MYBP10242 640 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 TNNC1P63316 161 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 UBE4AQ14139 1066 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 TRADDQ15628 312 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 LETM2Q2VYF4 491 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 CAVIN4Q5BKX8 364 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 SV2BQ7L1I2 683 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 CALML4Q96GE6 196 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 KLC4Q9NSK0 619 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 PCDHGC5Q9Y5F6 944 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 PVALEFA0A1B0GWK0 134 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
U2AF1-210ENST00000478282 RAD51CO43502 376 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 CYTH3O43739 400 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 RASSF9O75901 435 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 SERPING1P05155 500 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 CCDC172P0C7W6 258 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 TECP42680 631 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 ZKSCAN4Q969J2 545 aaPredicted RBP16.36■□□□□ 0.21
U2AF1-210ENST00000478282 CYFIP2Q96F07 1278 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 TACO1Q9BSH4 297 aaKnown RBP16.36■□□□□ 0.21
U2AF1-210ENST00000478282 NUCKS1Q9H1E3 243 aaKnown RBP16.36■□□□□ 0.21
U2AF1-210ENST00000478282 TAF1DQ9H5J8 278 aaPredicted RBP16.36■□□□□ 0.21
U2AF1-210ENST00000478282 CD248Q9HCU0 757 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 IL17RBQ9NRM6 502 aa16.36■□□□□ 0.21
U2AF1-210ENST00000478282 KCNMA1Q12791 1236 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 KRT25Q7Z3Z0 450 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 SYN2Q92777 582 aaPredicted RBP16.35■□□□□ 0.21
U2AF1-210ENST00000478282 CEP72Q9P209 647 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 MYMKA6NI61 221 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 KLRC1P26715 233 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 HPDP32754 393 aaPredicted RBP16.35■□□□□ 0.21
U2AF1-210ENST00000478282 TFAP4Q01664 338 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 MECOMQ03112 1051 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 SFMBT2Q5VUG0 894 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 EIF1ADQ8N9N8 165 aaKnown RBP16.35■□□□□ 0.21
U2AF1-210ENST00000478282 USP38Q8NB14 1042 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 ANKS1AQ92625 1134 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 NLRC4Q9NPP4 1024 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 CCDC88AQ3V6T2 1871 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 C10orf71Q711Q0 1435 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 TLR2O60603 784 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 HOXA10P31260 410 aaPredicted RBP16.35■□□□□ 0.21
U2AF1-210ENST00000478282 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
U2AF1-210ENST00000478282 TANGO6Q9C0B7 1094 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 BLOC1S4Q9NUP1 217 aa16.35■□□□□ 0.21
U2AF1-210ENST00000478282 RDXP35241 583 aaKnown RBP16.34■□□□□ 0.21
U2AF1-210ENST00000478282 C3orf20Q8ND61 904 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 ISCUQ9H1K1 167 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 ACTR5Q9H9F9 607 aaPredicted RBP16.34■□□□□ 0.21
U2AF1-210ENST00000478282 PPANQ9NQ55 473 aaKnown RBP16.34■□□□□ 0.21
U2AF1-210ENST00000478282 TMEM59LQ9UK28 342 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 PACSIN2Q9UNF0 486 aaPredicted RBP16.34■□□□□ 0.21
U2AF1-210ENST00000478282 MMP10P09238 476 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 EHHADHQ08426 723 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 FAM84BQ96KN1 310 aaPredicted RBP16.34■□□□□ 0.21
U2AF1-210ENST00000478282 NLRP3Q96P20 1036 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 ZMYND12Q9H0C1 365 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 SLC40A1Q9NP59 571 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms