RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 INHBCP55103 352 aa5.92□□□□□ -1.46
NCKAP1-204ENST00000477988 CYP4F3Q08477 520 aa5.92□□□□□ -1.46
NCKAP1-204ENST00000477988 TESK1Q15569 626 aa5.92□□□□□ -1.46
NCKAP1-204ENST00000477988 STEAP3Q658P3 488 aa5.92□□□□□ -1.46
NCKAP1-204ENST00000477988 TRMT10BQ6PF06 316 aaKnown RBP5.92□□□□□ -1.46
NCKAP1-204ENST00000477988 PHOSPHO1Q8TCT1 267 aa5.92□□□□□ -1.46
NCKAP1-204ENST00000477988 CHGBP05060 677 aa5.91□□□□□ -1.46
NCKAP1-204ENST00000477988 HOXC12P31275 282 aa5.91□□□□□ -1.46
NCKAP1-204ENST00000477988 NRN1LQ496H8 165 aa5.91□□□□□ -1.46
NCKAP1-204ENST00000477988 NAF1Q96HR8 494 aaKnown RBP5.91□□□□□ -1.46
NCKAP1-204ENST00000477988 SHDQ96IW2 340 aa5.91□□□□□ -1.46
NCKAP1-204ENST00000477988 GZF1Q9H116 711 aaPredicted RBP5.91□□□□□ -1.46
NCKAP1-204ENST00000477988 PLSCR1O15162 318 aa5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 MEFVO15553 781 aaPredicted RBP5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 FOXS1O43638 330 aa5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 SCG5P05408 212 aa5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 COL6A1P12109 1028 aa5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 PTH1RQ03431 593 aa5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 LSAMPQ13449 338 aa5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 NCAPHQ15003 741 aa5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 ACBD5Q5T8D3 534 aaPredicted RBP5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 LRCH2Q5VUJ6 765 aa5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 CCDC103Q8IW40 242 aa5.9□□□□□ -1.46
NCKAP1-204ENST00000477988 MAFKO60675 156 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 CNOT4O95628 575 aaKnown RBP5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 CPP00450 1065 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 ZNF16P17020 682 aaPredicted RBP5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 USP39Q53GS9 565 aaKnown RBP5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 CYP4F22Q6NT55 531 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 TCTN3Q6NUS6 607 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 RALYLQ86SE5 291 aaKnown RBP5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 EDAQ92838 391 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 VOPP1Q96AW1 172 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 GPRASP2Q96D09 838 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 CCDC140Q96MF4 163 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 ADOQ96SZ5 270 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 SMOC1Q9H4F8 434 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 TMEFF2Q9UIK5 374 aaPredicted RBP5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 WASF3Q9UPY6 502 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 SLC4A7Q9Y6M7 1214 aa5.89□□□□□ -1.47
NCKAP1-204ENST00000477988 ARNTLO00327 626 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 PPFIA2O75334 1257 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 DGKIO75912 1065 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 KLHL18O94889 574 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 LSM12Q3MHD2 195 aaKnown RBP5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 Q6ZUG5 572 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 RCBTB1Q8NDN9 531 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 NUDT10Q8NFP7 164 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 EXTL1Q92935 676 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 PPP1R14AQ96A00 147 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 NUDT11Q96G61 164 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 AJUBAQ96IF1 538 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 GNRHR2Q96P88 292 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 CSRNP2Q9H175 543 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 EPB41L1Q9H4G0 881 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 MYOTQ9UBF9 498 aa5.88□□□□□ -1.47
NCKAP1-204ENST00000477988 LTBRP36941 435 aa5.87□□□□□ -1.47
NCKAP1-204ENST00000477988 DGCR2P98153 550 aa5.87□□□□□ -1.47
NCKAP1-204ENST00000477988 TMC5Q6UXY8 1006 aa5.87□□□□□ -1.47
NCKAP1-204ENST00000477988 LDLRAD3Q86YD5 345 aa5.87□□□□□ -1.47
NCKAP1-204ENST00000477988 TRIM48Q8IWZ4 208 aa5.87□□□□□ -1.47
NCKAP1-204ENST00000477988 KREMEN2Q8NCW0 462 aa5.87□□□□□ -1.47
NCKAP1-204ENST00000477988 TTLL11Q8NHH1 800 aa5.87□□□□□ -1.47
NCKAP1-204ENST00000477988 CRAMP1Q96RY5 1269 aa5.87□□□□□ -1.47
NCKAP1-204ENST00000477988 FBXL7Q9UJT9 491 aa5.87□□□□□ -1.47
NCKAP1-204ENST00000477988 SNRPB2P08579 225 aaKnown RBP5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 ATXN1P54253 815 aaKnown RBP5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 SMAD2Q15796 467 aaKnown RBP5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 VASNQ6EMK4 673 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 SCUBE1Q8IWY4 988 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 REXO1L1PQ8IX06 675 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 DTX3Q8N9I9 347 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 CPLX3Q8WVH0 158 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 BTN2A2Q8WVV5 523 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 ZG16BQ96DA0 208 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 CHAMP1Q96JM3 812 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 LMF1Q96S06 567 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 ASH2LQ9UBL3 628 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 PCDHA2Q9Y5H9 948 aa5.86□□□□□ -1.47
NCKAP1-204ENST00000477988 KRIT1O00522 736 aa5.85□□□□□ -1.47
NCKAP1-204ENST00000477988 ECI1P42126 302 aa5.85□□□□□ -1.47
NCKAP1-204ENST00000477988 GJA8P48165 433 aa5.85□□□□□ -1.47
NCKAP1-204ENST00000477988 DPY19L2P1Q6NXN4 242 aa5.85□□□□□ -1.47
NCKAP1-204ENST00000477988 PROSER1Q86XN7 944 aa5.85□□□□□ -1.47
NCKAP1-204ENST00000477988 IFNL2Q8IZJ0 200 aa5.85□□□□□ -1.47
NCKAP1-204ENST00000477988 NEU4Q8WWR8 484 aaPredicted RBP5.85□□□□□ -1.47
NCKAP1-204ENST00000477988 SEC16BQ96JE7 1060 aa5.85□□□□□ -1.47
NCKAP1-204ENST00000477988 CLDND1Q9NY35 253 aa5.85□□□□□ -1.47
NCKAP1-204ENST00000477988 SCAMP3O14828 347 aaKnown RBP5.84□□□□□ -1.47
NCKAP1-204ENST00000477988 KNG1P01042 644 aa5.84□□□□□ -1.47
NCKAP1-204ENST00000477988 NASPP49321 788 aaPredicted RBP5.84□□□□□ -1.47
NCKAP1-204ENST00000477988 AGBL4Q5VU57 503 aa5.84□□□□□ -1.47
NCKAP1-204ENST00000477988 PCSK4Q6UW60 755 aa5.84□□□□□ -1.47
NCKAP1-204ENST00000477988 PPIL6Q8IXY8 311 aa5.84□□□□□ -1.47
NCKAP1-204ENST00000477988 GIMAP8Q8ND71 665 aaPredicted RBP5.84□□□□□ -1.47
NCKAP1-204ENST00000477988 STRIP2Q9ULQ0 834 aa5.84□□□□□ -1.47
NCKAP1-204ENST00000477988 FBXO21O94952 628 aa5.83□□□□□ -1.48
NCKAP1-204ENST00000477988 COMTP21964 271 aa5.83□□□□□ -1.48
NCKAP1-204ENST00000477988 LMO1P25800 156 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms