RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 ZC3H3Q8IXZ2 948 aaKnown RBP19.97■□□□□ 0.79
CCM2-209ENST00000477605 TBC1D16Q8TBP0 767 aa19.97■□□□□ 0.79
CCM2-209ENST00000477605 TANGO6Q9C0B7 1094 aa19.97■□□□□ 0.79
CCM2-209ENST00000477605 CDK5RAP2Q96SN8 1893 aa19.97■□□□□ 0.79
CCM2-209ENST00000477605 AGPSO00116 658 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 TRAF5O00463 557 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 MARCH6O60337 910 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 MYBL2P10244 700 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 AKR1B1P15121 316 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 ALS2CLQ60I27 953 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 LRRC1Q9BTT6 524 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 GPCPD1Q9NPB8 672 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 ZBTB5O15062 677 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 CFAP221Q4G0U5 840 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 LRRC31Q6UY01 552 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 DPP8Q6V1X1 898 aaPredicted RBP19.96■□□□□ 0.79
CCM2-209ENST00000477605 SLC51AQ86UW1 340 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 TRIM59Q8IWR1 403 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 LRRC47Q8N1G4 583 aaKnown RBP19.96■□□□□ 0.79
CCM2-209ENST00000477605 CAVIN3Q969G5 261 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 CRAMP1Q96RY5 1269 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 TLR10Q9BXR5 811 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 STIM2Q9P246 746 aa19.96■□□□□ 0.79
CCM2-209ENST00000477605 PPP1R1BQ9UD71 204 aaPredicted RBP19.96■□□□□ 0.79
CCM2-209ENST00000477605 FEZ2Q9UHY8 353 aaPredicted RBP19.96■□□□□ 0.79
CCM2-209ENST00000477605 GOLGA8KD6RF30 607 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 OPA1O60313 960 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 SHOX2O60902 331 aaPredicted RBP19.95■□□□□ 0.78
CCM2-209ENST00000477605 ZMYND10O75800 440 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 USP11P51784 963 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 LRRC41Q15345 812 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 FAM83BQ5T0W9 1011 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 KLHDC7AQ5VTJ3 777 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 MCTP2Q6DN12 878 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 FAM76AQ8TAV0 307 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 PSTPIP2Q9H939 334 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 ATP6V0A2Q9Y487 856 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 GRID2IPA4D2P6 1211 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 A6NNZ2 444 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 PPFIA4O75335 1185 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 ECM1Q16610 540 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 EDRF1Q3B7T1 1238 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 TUBB8Q3ZCM7 444 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 NFRKBQ6P4R8 1299 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 MOXD1Q6UVY6 613 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 GBP6Q6ZN66 633 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 SGIP1Q9BQI5 828 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 POLLQ9UGP5 575 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 SERPINB13Q9UIV8 391 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 RRP15Q9Y3B9 282 aaKnown RBP19.95■□□□□ 0.78
CCM2-209ENST00000477605 PCDHA2Q9Y5H9 948 aa19.95■□□□□ 0.78
CCM2-209ENST00000477605 PITPNM2Q9BZ72 1349 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 CYP3A7-CYP3A51PA0A087WV96 503 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 MYO1CO00159 1063 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 NOL4O94818 638 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 EPB41P11171 864 aaKnown RBP19.94■□□□□ 0.78
CCM2-209ENST00000477605 CYP3A7P24462 503 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 HMGB2P26583 209 aaKnown RBP19.94■□□□□ 0.78
CCM2-209ENST00000477605 RASSF7Q02833 373 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 GFPT1Q06210 699 aaPredicted RBP19.94■□□□□ 0.78
CCM2-209ENST00000477605 NAB2Q15742 525 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 SH3GL2Q99962 352 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 COA1Q9GZY4 146 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 AIPL1Q9NZN9 384 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.94■□□□□ 0.78
CCM2-209ENST00000477605 STK24Q9Y6E0 443 aa19.94■□□□□ 0.78
CCM2-209ENST00000477605 PPP1R11O60927 126 aaPredicted RBP19.93■□□□□ 0.78
CCM2-209ENST00000477605 PPFIA1Q13136 1202 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 UBE2SQ16763 222 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 TDRD12Q587J7 1177 aaKnown RBP19.93■□□□□ 0.78
CCM2-209ENST00000477605 C10orf76Q5T2E6 689 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 HAUS3Q68CZ6 603 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 SND1Q7KZF4 910 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCM2-209ENST00000477605 DMGDHQ9UI17 866 aaKnown RBP19.93■□□□□ 0.78
CCM2-209ENST00000477605 FRMD3A2A2Y4 597 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 BTNL10A8MVZ5 291 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 PLA2G4BP0C869 781 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 SLC1A4P43007 532 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 SLC18A3Q16572 532 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 SLFN12Q8IYM2 578 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 SLC16A10Q8TF71 515 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 CCDC17Q96LX7 622 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 DRC1Q96MC2 740 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 MBOAT7Q96N66 472 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 LSM14BQ9BX40 385 aaKnown RBP19.93■□□□□ 0.78
CCM2-209ENST00000477605 RASSF4Q9H2L5 321 aa19.93■□□□□ 0.78
CCM2-209ENST00000477605 GOLGA6CA6NDK9 693 aa19.92■□□□□ 0.78
CCM2-209ENST00000477605 GOLGA6DP0CG33 693 aa19.92■□□□□ 0.78
CCM2-209ENST00000477605 C8orf74Q6P047 294 aa19.92■□□□□ 0.78
CCM2-209ENST00000477605 COL23A1Q86Y22 540 aaPredicted RBP19.92■□□□□ 0.78
CCM2-209ENST00000477605 IFT20Q8IY31 132 aa19.92■□□□□ 0.78
CCM2-209ENST00000477605 GLIS3Q8NEA6 775 aa19.92■□□□□ 0.78
CCM2-209ENST00000477605 KCTD10Q9H3F6 313 aa19.92■□□□□ 0.78
CCM2-209ENST00000477605 KCNMB3Q9NPA1 279 aa19.92■□□□□ 0.78
CCM2-209ENST00000477605 GOLGA6AQ9NYA3 693 aa19.92■□□□□ 0.78
CCM2-209ENST00000477605 SALL4Q9UJQ4 1053 aa19.92■□□□□ 0.78
CCM2-209ENST00000477605 CES2O00748 559 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 TLR2O60603 784 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 SERPINB2P05120 415 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 APBA1Q02410 837 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms