RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 LRRC42Q9Y546 428 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 E7ENQ6 273 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 JAK2O60674 1132 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 PFDN1O60925 122 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 CLTAP09496 248 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 TROVE2P10155 538 aaKnown RBP eCLIP13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 GUCY1A3Q02108 690 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 RESTQ13127 1097 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 KRT72Q14CN4 511 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 IQCEQ6IPM2 695 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 RASGRP2Q7LDG7 609 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 TBC1D10CQ8IV04 446 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 ARL8AQ96BM9 186 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 HSD3B7Q9H2F3 369 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 RNF41Q9H4P4 317 aaPredicted RBP13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 KCNMB3Q9NPA1 279 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 LZTFL1Q9NQ48 299 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 FANCLQ9NW38 375 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 ANGEL1Q9UNK9 670 aaKnown RBP13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 KLF18A0A0U1RQI7 1052 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 GFPT2O94808 682 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 SULT2A1Q06520 285 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 CRY2Q49AN0 593 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 MFSD6Q6ZSS7 791 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 SAPCD2Q86UD0 394 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 MIGA1Q8NAN2 632 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 SEC16BQ96JE7 1060 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 EPB41L4AQ9HCS5 686 aaPredicted RBP13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 SLC12A4Q9UP95 1085 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 CEP131Q9UPN4 1083 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 PTPDC1A2A3K4 754 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 WTIPA6NIX2 430 aaPredicted RBP13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 HMGB1P1B2RPK0 211 aaPredicted RBP13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 SMARCA1P28370 1054 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 ATP1A2P50993 1020 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 SEC24CP53992 1094 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 EPHB4P54760 987 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 ANTXR2P58335 489 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 BPIFB4P59827 614 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 MYL5Q02045 173 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 KLC1Q07866 573 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 SPECC1LQ69YQ0 1117 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 CEP128Q6ZU80 1094 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 ZNF365Q70YC5 407 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 CD302Q8IX05 232 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 FLAD1Q8NFF5 587 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 NEK9Q8TD19 979 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 NCSTNQ92542 709 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 SDF4Q9BRK5 362 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 DESI2Q9BSY9 194 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 NRDE2Q9H7Z3 1164 aa13.85□□□□□ -0.19
RTFDC1-207ENST00000477573 COL1A1P02452 1464 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 GOLGA8BA8MQT2 603 aa13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 BBOX1O75936 387 aa13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 NEK2P51955 445 aa13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 GKAP1Q5VSY0 366 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 TRAPPC11Q7Z392 1133 aa13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 SLC15A3Q8IY34 581 aa13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 CAVIN3Q969G5 261 aa13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 SMC6Q96SB8 1091 aa13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 ZNF148Q9UQR1 794 aa13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 CHD4Q14839 1912 aa13.84□□□□□ -0.19
RTFDC1-207ENST00000477573 B4E1Z4 1266 aa13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 CPLX1O14810 134 aa13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 APBA3O96018 575 aa13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 SP100P23497 879 aaPredicted RBP13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 KLRK1P26718 216 aa13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 SND1Q7KZF4 910 aaKnown RBP eCLIP13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 ZNF804AQ7Z570 1209 aa13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 FMR1NBQ8N0W7 255 aaPredicted RBP13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 PROM2Q8N271 834 aa13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 NLGN1Q8N2Q7 840 aa13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 DPF2Q92785 391 aa13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 DDX27Q96GQ7 796 aaKnown RBP13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 NAP1L3Q99457 506 aaPredicted RBP13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 SYT15Q9BQS2 421 aa13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 CTDP1Q9Y5B0 961 aaPredicted RBP13.83□□□□□ -0.19
RTFDC1-207ENST00000477573 TRAPPC3O43617 180 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 PRKAB2O43741 272 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 DTNBO60941 627 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 WFS1O76024 890 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 TPPPO94811 219 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 ATP1A3P13637 1013 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 ATP6V1C1P21283 382 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 RXRBP28702 533 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 SOGA3Q5TF21 947 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 C15orf52Q6ZUT6 534 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 CACNA2D4Q7Z3S7 1137 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 TMC4Q7Z404 712 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 PNMA8AQ86V59 439 aaPredicted RBP13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 TCHPQ9BT92 498 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 NCOA5Q9HCD5 579 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 TIAM2Q8IVF5 1701 aa13.83□□□□□ -0.2
RTFDC1-207ENST00000477573 CACNA1SQ13698 1873 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 A0A1W2PQ27 194 aa13.82□□□□□ -0.2
RTFDC1-207ENST00000477573 A0A1W2PQ64 194 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms