RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 C16orf70Q9BSU1 422 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 PHF20Q9BVI0 1012 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 TBC1D22BQ9NU19 505 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 ORC3Q9UBD5 711 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 ZNF215Q9UL58 517 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 ZMYND8Q9ULU4 1186 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 IGLV3-22A0A075B6J6 115 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 TRIM43BA6NCK2 446 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 PITPNM1O00562 1244 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 PTGS1P23219 599 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 HOXC8P31273 242 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 ZNF76P36508 570 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 SLC26A2P50443 739 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 RBL2Q08999 1139 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 NPY5RQ15761 445 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 JAKMIP3Q5VZ66 844 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 MFSD5Q6N075 450 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 CHRDL2Q6WN34 429 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 CYFIP1Q7L576 1253 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 NSUN7Q8NE18 718 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 SEPT1Q8WYJ6 367 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 TNPO1Q92973 898 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 TRIM43Q96BQ3 446 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 NAP1L4Q99733 375 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 SDF4Q9BRK5 362 aa14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 AGO4Q9HCK5 861 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 COLQQ9Y215 455 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-205ENST00000477360 H3BRB1 525 aa14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 ATP9AO75110 1047 aa14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 PARNO95453 639 aaKnown RBP14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 FDPSP14324 419 aaKnown RBP14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 PSEN2P49810 448 aa14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 MFSD10Q14728 455 aa14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 TUT1Q9H6E5 874 aaKnown RBP14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 BRMS1Q9HCU9 246 aa14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 JPH1Q9HDC5 661 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 PRDM5Q9NQX1 630 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 TMEM260Q9NX78 707 aa14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 GTF2IRD1Q9UHL9 959 aa14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 EMSYQ7Z589 1322 aa14.06□□□□□ -0.16
CLCNKA-205ENST00000477360 FAM86B1E9PN63 330 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 B4GALT4O60513 344 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 LGR5O75473 907 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 ATG7O95352 703 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 LGALS2P05162 132 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 RPLP2P05387 115 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 FAM86B2P0C5J1 330 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 GNAT1P11488 350 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 GCFC2P16383 781 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 SYN1P17600 705 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 RFC2P35250 354 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 PSMC6P62333 389 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 KIAA0753Q2KHM9 967 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 LRIT3Q3SXY7 679 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 Q4G0T1 1027 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 HABP4Q5JVS0 413 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 TDHQ8IZJ6 230 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 TMEM199Q8N511 208 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 CCDC155Q8N6L0 562 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 C7orf31Q8N865 590 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 CAGE1Q8TC20 777 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 MBOAT7Q96N66 472 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 RIT2Q99578 217 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 ALG1Q9BT22 464 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 ERAP1Q9NZ08 941 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
CLCNKA-205ENST00000477360 DNAH12Q6ZR08 3092 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 IPO5O00410 1097 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 CAND2O75155 1236 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 LARGE1O95461 756 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 PFKMP08237 780 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 FPGSQ05932 587 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 PPIGQ13427 754 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 BFSP2Q13515 415 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 NONOQ15233 471 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 PPP4R3AQ6IN85 833 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 ZNF746Q6NUN9 644 aaPredicted RBP14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 GPR153Q6NV75 609 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 FAM43BQ6ZT52 329 aaPredicted RBP14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 PLPPR4Q7Z2D5 763 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 SH3RF1Q7Z6J0 888 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 PLA2G4DQ86XP0 818 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 SMAP1Q8IYB5 467 aaPredicted RBP14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 NECAB1Q8N987 351 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 CYP2W1Q8TAV3 490 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 LENG9Q96B70 501 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 NOC4LQ9BVI4 516 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 UBE2OQ9C0C9 1292 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 HIPK3Q9H422 1215 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 SMARCAD1Q9H4L7 1026 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 KIF3AQ9Y496 699 aa14.04□□□□□ -0.16
CLCNKA-205ENST00000477360 RANBP2P49792 3224 aaKnown RBP14.03□□□□□ -0.16
CLCNKA-205ENST00000477360 IGKV6D-21A0A0A0MT36 114 aa14.03□□□□□ -0.16
CLCNKA-205ENST00000477360 CCDC194A0A1B0GVG4 234 aa14.03□□□□□ -0.16
CLCNKA-205ENST00000477360 GSTTP1A0A1W2PQM5 241 aa14.03□□□□□ -0.16
CLCNKA-205ENST00000477360 DHX15O43143 795 aaKnown RBP14.03□□□□□ -0.16
CLCNKA-205ENST00000477360 TCF7P36402 384 aaPredicted RBP14.03□□□□□ -0.16
CLCNKA-205ENST00000477360 KRT76Q01546 638 aa14.03□□□□□ -0.16
CLCNKA-205ENST00000477360 PTK7Q13308 1070 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms