RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 AP5M1Q9H0R1 490 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 TMEM60Q9H2L4 133 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 DDX25Q9UHL0 483 aaKnown RBP18.02■□□□□ 0.48
COPS3-207ENST00000477299 PCDHB6Q9Y5E3 794 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 MCM7P33993 719 aa18.01■□□□□ 0.47
COPS3-207ENST00000477299 FSCN1Q16658 493 aaKnown RBP18.01■□□□□ 0.47
COPS3-207ENST00000477299 KCNV1Q6PIU1 500 aa18.01■□□□□ 0.47
COPS3-207ENST00000477299 HAS1Q92839 578 aa18.01■□□□□ 0.47
COPS3-207ENST00000477299 FERMT2Q96AC1 680 aa18.01■□□□□ 0.47
COPS3-207ENST00000477299 CHAMP1Q96JM3 812 aa18.01■□□□□ 0.47
COPS3-207ENST00000477299 ZNF577Q9BSK1 485 aa18.01■□□□□ 0.47
COPS3-207ENST00000477299 MLXIPQ9HAP2 919 aa18.01■□□□□ 0.47
COPS3-207ENST00000477299 ALPK3Q96L96 1907 aa18.01■□□□□ 0.47
COPS3-207ENST00000477299 MYH9P35579 1960 aaKnown RBP18■□□□□ 0.47
COPS3-207ENST00000477299 GSTTP1A0A1W2PQM5 241 aa18■□□□□ 0.47
COPS3-207ENST00000477299 IPO5O00410 1097 aaKnown RBP18■□□□□ 0.47
COPS3-207ENST00000477299 NKRFO15226 690 aaKnown RBP eCLIP18■□□□□ 0.47
COPS3-207ENST00000477299 MAFGO15525 162 aa18■□□□□ 0.47
COPS3-207ENST00000477299 CCNE2O96020 404 aa18■□□□□ 0.47
COPS3-207ENST00000477299 NKX3-2P78367 333 aa18■□□□□ 0.47
COPS3-207ENST00000477299 TTC38Q5R3I4 469 aa18■□□□□ 0.47
COPS3-207ENST00000477299 PPP4R3AQ6IN85 833 aa18■□□□□ 0.47
COPS3-207ENST00000477299 MOXD1Q6UVY6 613 aa18■□□□□ 0.47
COPS3-207ENST00000477299 ETNPPLQ8TBG4 499 aa18■□□□□ 0.47
COPS3-207ENST00000477299 SLC5A5Q92911 643 aa18■□□□□ 0.47
COPS3-207ENST00000477299 SPATA33Q96N06 139 aa18■□□□□ 0.47
COPS3-207ENST00000477299 SENP7Q9BQF6 1050 aa18■□□□□ 0.47
COPS3-207ENST00000477299 FTOQ9C0B1 505 aaKnown RBP eCLIP18■□□□□ 0.47
COPS3-207ENST00000477299 Q9Y3F1 56 aa18■□□□□ 0.47
COPS3-207ENST00000477299 TRIP12Q14669 1992 aaPredicted RBP18■□□□□ 0.47
COPS3-207ENST00000477299 A6NJR5 290 aa17.99■□□□□ 0.47
COPS3-207ENST00000477299 MMP3P08254 477 aa17.99■□□□□ 0.47
COPS3-207ENST00000477299 MYL3P08590 195 aa17.99■□□□□ 0.47
COPS3-207ENST00000477299 ANP32AP39687 249 aaKnown RBP17.99■□□□□ 0.47
COPS3-207ENST00000477299 LAMC2Q13753 1193 aa17.99■□□□□ 0.47
COPS3-207ENST00000477299 NEDD9Q14511 834 aa17.99■□□□□ 0.47
COPS3-207ENST00000477299 FOXD4L6Q3SYB3 417 aaPredicted RBP17.99■□□□□ 0.47
COPS3-207ENST00000477299 FOXD4L3Q6VB84 417 aaPredicted RBP17.99■□□□□ 0.47
COPS3-207ENST00000477299 C4orf32Q8N8J7 132 aa17.99■□□□□ 0.47
COPS3-207ENST00000477299 ARRDC4Q8NCT1 418 aa17.99■□□□□ 0.47
COPS3-207ENST00000477299 PAWRQ96IZ0 340 aaKnown RBP17.99■□□□□ 0.47
COPS3-207ENST00000477299 CDHR1Q96JP9 859 aa17.99■□□□□ 0.47
COPS3-207ENST00000477299 KCNMB3Q9NPA1 279 aa17.99■□□□□ 0.47
COPS3-207ENST00000477299 PSMD10O75832 226 aa17.98■□□□□ 0.47
COPS3-207ENST00000477299 ASGR1P07306 291 aa17.98■□□□□ 0.47
COPS3-207ENST00000477299 ZSCAN22P10073 491 aaPredicted RBP17.98■□□□□ 0.47
COPS3-207ENST00000477299 DDIT3P35638 169 aa17.98■□□□□ 0.47
COPS3-207ENST00000477299 METTL7BQ6UX53 244 aa17.98■□□□□ 0.47
COPS3-207ENST00000477299 CXCL17Q6UXB2 119 aa17.98■□□□□ 0.47
COPS3-207ENST00000477299 EMID1Q96A84 441 aaPredicted RBP17.98■□□□□ 0.47
COPS3-207ENST00000477299 GPR20Q99678 358 aa17.98■□□□□ 0.47
COPS3-207ENST00000477299 NFASCO94856 1347 aa17.98■□□□□ 0.47
COPS3-207ENST00000477299 SCN10AQ9Y5Y9 1956 aa17.97■□□□□ 0.47
COPS3-207ENST00000477299 ZNF286BP0CG31 522 aa17.97■□□□□ 0.47
COPS3-207ENST00000477299 GCFC2P16383 781 aaKnown RBP17.97■□□□□ 0.47
COPS3-207ENST00000477299 CST5P28325 142 aaPredicted RBP17.97■□□□□ 0.47
COPS3-207ENST00000477299 ACLYP53396 1101 aa17.97■□□□□ 0.47
COPS3-207ENST00000477299 PSMC6P62333 389 aa17.97■□□□□ 0.47
COPS3-207ENST00000477299 SETQ01105 290 aaPredicted RBP17.97■□□□□ 0.47
COPS3-207ENST00000477299 UBE2Q1Q7Z7E8 422 aa17.97■□□□□ 0.47
COPS3-207ENST00000477299 RNF180Q86T96 592 aa17.97■□□□□ 0.47
COPS3-207ENST00000477299 PCYT2Q99447 389 aa17.97■□□□□ 0.47
COPS3-207ENST00000477299 UNC45AQ9H3U1 944 aa17.97■□□□□ 0.47
COPS3-207ENST00000477299 SPC25Q9HBM1 224 aa17.97■□□□□ 0.47
COPS3-207ENST00000477299 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.97■□□□□ 0.47
COPS3-207ENST00000477299 SLC9A2Q9UBY0 812 aa17.97■□□□□ 0.47
COPS3-207ENST00000477299 RBAK-RBAKDNI3L0D1 243 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 EML1O00423 815 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 DNM1LO00429 736 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 F13A1P00488 732 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 ACTR2P61160 394 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 IL17AQ16552 155 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 CALCRLQ16602 461 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 UTP14CQ5TAP6 766 aaKnown RBP17.96■□□□□ 0.47
COPS3-207ENST00000477299 LRCH2Q5VUJ6 765 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 TRIM50Q86XT4 487 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 PPTC7Q8NI37 304 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 KAT2BQ92831 832 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 MTMR9Q96QG7 549 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 SDF4Q9BRK5 362 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 SENP6Q9GZR1 1112 aaPredicted RBP17.96■□□□□ 0.47
COPS3-207ENST00000477299 JPH1Q9HDC5 661 aaPredicted RBP17.96■□□□□ 0.47
COPS3-207ENST00000477299 PCDH10Q9P2E7 1040 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 DAXXQ9UER7 740 aaPredicted RBP17.96■□□□□ 0.47
COPS3-207ENST00000477299 NOL7Q9UMY1 257 aaKnown RBP17.96■□□□□ 0.47
COPS3-207ENST00000477299 PHF24Q9UPV7 400 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 CLIC4Q9Y696 253 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 KAT6AQ92794 2004 aa17.96■□□□□ 0.47
COPS3-207ENST00000477299 GRIN2DO15399 1336 aa17.96■□□□□ 0.46
COPS3-207ENST00000477299 A0A1W2PQ45 241 aaPredicted RBP17.95■□□□□ 0.46
COPS3-207ENST00000477299 A0A1W2PQY0 241 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 KBTBD13C9JR72 458 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 CHMP2AO43633 222 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 NEMFO60524 1076 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 BRD1O95696 1058 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 COL6A1P12109 1028 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 TXKP42681 527 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 TRAPPC10P48553 1259 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 PURAQ00577 322 aaKnown RBP17.95■□□□□ 0.46
COPS3-207ENST00000477299 CEBPZQ03701 1054 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms