RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 FAM177A1Q8N128 213 aaPredicted RBP6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 TOE1Q96GM8 510 aaKnown RBP6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 SCLYQ96I15 445 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 KCNJ15Q99712 375 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 SYT3Q9BQG1 590 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 GORASP1Q9BQQ3 440 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 NCOA5Q9HCD5 579 aaKnown RBP6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 SPATA6Q9NWH7 488 aaPredicted RBP6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 TMEM260Q9NX78 707 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 DTLQ9NZJ0 730 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 PCDHA9Q9Y5H5 950 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 PMF1-BGLAPU3KQ54 211 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 SLC27A2O14975 620 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 GNAT1P11488 350 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 KCNA6P17658 529 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 TEPPQ6URK8 271 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 ZC3H18Q86VM9 953 aaKnown RBP6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 MARCH10Q8NA82 808 aaPredicted RBP6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 SH3RF2Q8TEC5 729 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 SH3TC2Q8TF17 1288 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 FBXW5Q969U6 566 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 DDX11Q96FC9 970 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 RNPC3Q96LT9 517 aaKnown RBP6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 C11orf84Q9BUA3 381 aaPredicted RBP6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 TRIM39Q9HCM9 518 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 DSEQ9UL01 958 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 TELO2Q9Y4R8 837 aa6.68□□□□□ -1.34
SOX2-OT-207ENST00000476964 PLD2O14939 933 aa6.67□□□□□ -1.34
SOX2-OT-207ENST00000476964 CKMP06732 381 aa6.67□□□□□ -1.34
SOX2-OT-207ENST00000476964 STAT5AP42229 794 aa6.67□□□□□ -1.34
SOX2-OT-207ENST00000476964 LACTBP83111 547 aaPredicted RBP6.67□□□□□ -1.34
SOX2-OT-207ENST00000476964 MTDHQ86UE4 582 aaKnown RBP6.67□□□□□ -1.34
SOX2-OT-207ENST00000476964 KYQ8NBH2 561 aa6.67□□□□□ -1.34
SOX2-OT-207ENST00000476964 ZNF526Q8TF50 670 aaPredicted RBP6.67□□□□□ -1.34
SOX2-OT-207ENST00000476964 KCNC2Q96PR1 638 aa6.67□□□□□ -1.34
SOX2-OT-207ENST00000476964 WASF3Q9UPY6 502 aa6.67□□□□□ -1.34
SOX2-OT-207ENST00000476964 TRIM13O60858 407 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 AMY2AP04746 511 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 AMY2BP19961 511 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 ITGA1P56199 1179 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 NKX3-2P78367 333 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 GPR19Q15760 415 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 VMACQ2NL98 169 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 FNDC3BQ53EP0 1204 aaKnown RBP6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 PRR31Q5SQ13 230 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 RBM12BQ8IXT5 1001 aaKnown RBP6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 MAGEB10Q96LZ2 347 aaPredicted RBP6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 CLUHP3Q96NS8 147 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 NDOR1Q9UHB4 597 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 CBLCQ9ULV8 474 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 NUB1Q9Y5A7 615 aa6.66□□□□□ -1.34
SOX2-OT-207ENST00000476964 TCRBV16S1A1N1A0A5B0 115 aa6.65□□□□□ -1.34
SOX2-OT-207ENST00000476964 GSTA4O15217 222 aa6.65□□□□□ -1.34
SOX2-OT-207ENST00000476964 SMARCA5O60264 1052 aaPredicted RBP6.65□□□□□ -1.34
SOX2-OT-207ENST00000476964 PYGMP11217 842 aa6.65□□□□□ -1.34
SOX2-OT-207ENST00000476964 TUSC3Q13454 348 aa6.65□□□□□ -1.34
SOX2-OT-207ENST00000476964 KCTD1Q719H9 257 aa6.65□□□□□ -1.34
SOX2-OT-207ENST00000476964 OSTM1Q86WC4 334 aa6.65□□□□□ -1.34
SOX2-OT-207ENST00000476964 PROSER1Q86XN7 944 aa6.65□□□□□ -1.34
SOX2-OT-207ENST00000476964 TTLL6Q8N841 843 aa6.65□□□□□ -1.34
SOX2-OT-207ENST00000476964 SFMBT1Q9UHJ3 866 aa6.65□□□□□ -1.34
SOX2-OT-207ENST00000476964 BTBD11A6QL63 1104 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 ACOT7O00154 380 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 RFPL3O75679 317 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 LTFP02788 710 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 HMGB1P09429 215 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 PDE6AP16499 860 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 FAHP16930 419 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 ADAM9Q13443 819 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 LIPIQ6XZB0 460 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 ARHGAP36Q6ZRI8 547 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 BRAPQ7Z569 592 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 FGD2Q7Z6J4 655 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 ZC3H7AQ8IWR0 971 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 NLGN4XQ8N0W4 816 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 ZBTB8AQ96BR9 441 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 CELF4Q9BZC1 486 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 LUC7LQ9NQ29 371 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 SRPK3Q9UPE1 567 aa6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 ARID1BQ8NFD5 2236 aaPredicted RBP6.64□□□□□ -1.35
SOX2-OT-207ENST00000476964 ZNF561-AS1K7EIQ3 104 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 MAN2B1O00754 1011 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 PPP1R12AO14974 1030 aaPredicted RBP6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 RASGRP1O95267 797 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 RAPGEF3O95398 923 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 SRGAP2CP0DJJ0 459 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 THBS2P35442 1172 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 SLURP1P55000 103 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 GRIN1Q05586 938 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 CRY1Q16526 586 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 PAN2Q504Q3 1202 aaKnown RBP6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 TTLL10Q6ZVT0 673 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 ADGRG2Q8IZP9 1017 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 SYNPOQ8N3V7 929 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 YIPF4Q9BSR8 244 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 SMURF1Q9HCE7 757 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 PARD6AQ9NPB6 346 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 CATSPERZQ9NTU4 200 aa6.63□□□□□ -1.35
SOX2-OT-207ENST00000476964 RAPGEFL1Q9UHV5 662 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms