RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 SNUPNO95149 360 aaKnown RBP5.29□□□□□ -1.56
VPS13D-207ENST00000476169 U2AF1L5P0DN76 240 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-207ENST00000476169 MYBL2P10244 700 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 NEK3P51956 506 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 KPNA1P52294 538 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-207ENST00000476169 U2AF1Q01081 240 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS13D-207ENST00000476169 RASSF7Q02833 373 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 LMOD3Q0VAK6 560 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 IKZF1Q13422 519 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 AOC3Q16853 763 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 PLA2G4EQ3MJ16 856 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 IL31Q6EBC2 164 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 CEP68Q76N32 757 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 HDGFL2Q7Z4V5 671 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-207ENST00000476169 NLRP10Q86W26 655 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 DPF3Q92784 378 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 E2F7Q96AV8 911 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 TIFAQ96CG3 184 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 TRMT2BQ96GJ1 504 aaKnown RBP5.29□□□□□ -1.56
VPS13D-207ENST00000476169 MAP6Q96JE9 813 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 SCYL1Q96KG9 808 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 JAM3Q9BX67 310 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 RHOBTB2Q9BYZ6 727 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 CDIP1Q9H305 208 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 EMC7Q9NPA0 242 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 PRDM11Q9NQV5 511 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 SPTLC3Q9NUV7 552 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 OBP2AQ9NY56 170 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 MARCH2Q9P0N8 246 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 TNFRSF10DQ9UBN6 386 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 GULP1Q9UBP9 304 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 TAGLN3Q9UI15 199 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 DAAM1Q9Y4D1 1078 aa5.29□□□□□ -1.56
VPS13D-207ENST00000476169 TNKSO95271 1327 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 WTIPA6NIX2 430 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-207ENST00000476169 PRR19A6NJB7 356 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 RFPL1O75677 317 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 KRT37O76014 449 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 ABLIM3O94929 683 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 MT-CO1P00395 513 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 GNAT1P11488 350 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 PDE6AP16499 860 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 KRT15P19012 456 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 FPR2P25090 351 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 LACTBP83111 547 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-207ENST00000476169 PURAQ00577 322 aaKnown RBP5.28□□□□□ -1.56
VPS13D-207ENST00000476169 PRKCQQ04759 706 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 CXorf57Q6NSI4 855 aaKnown RBP5.28□□□□□ -1.56
VPS13D-207ENST00000476169 SLC51AQ86UW1 340 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 TEX2Q8IWB9 1127 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 TPH2Q8IWU9 490 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 CAMKK2Q96RR4 588 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 TMX4Q9H1E5 349 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-207ENST00000476169 OXSMQ9NWU1 459 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 STK17AQ9UEE5 414 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 ADGRE2Q9UHX3 823 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 VAV3Q9UKW4 847 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 FAM50BQ9Y247 325 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 COA3Q9Y2R0 106 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-207ENST00000476169 ZNF281Q9Y2X9 895 aa5.28□□□□□ -1.56
VPS13D-207ENST00000476169 SLC12A8A0AV02 714 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 FADS2P1A8MWK0 482 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 C22orf46C9J442 243 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 H7C1D1 291 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 ZNF561-AS1K7EIQ3 104 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 ULK1O75385 1050 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 PF4V1P10720 104 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 CEBPAP49715 358 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-207ENST00000476169 JAM2P57087 298 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 SPIRE1Q08AE8 756 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 KCNMA1Q12791 1236 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 FAPQ12884 760 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 DUSP4Q13115 394 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 RAPGEF1Q13905 1077 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 GPR19Q15760 415 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 MINDY4Q4G0A6 757 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 OTOP1Q7RTM1 612 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 OSTM1Q86WC4 334 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 MISP3Q96FF7 219 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 HHIPL1Q96JK4 782 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 LRGUKQ96M69 825 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 JMJD8Q96S16 334 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 BOCQ9BWV1 1114 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 CARS2Q9HA77 564 aaKnown RBP5.27□□□□□ -1.57
VPS13D-207ENST00000476169 H2AFY2Q9P0M6 372 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-207ENST00000476169 RCAN3Q9UKA8 241 aa5.27□□□□□ -1.57
VPS13D-207ENST00000476169 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-207ENST00000476169 A0A1W2PQ45 241 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-207ENST00000476169 A0A1W2PQY0 241 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 DGKIO75912 1065 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 GDF11O95390 407 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 FUCA1P04066 466 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 ITGB2P05107 769 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 COL6A2P12110 1019 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 CD53P19397 219 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 HOXA10P31260 410 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-207ENST00000476169 SESN3P58005 492 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 POU5F1BQ06416 359 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 MORC3Q14149 939 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 ZNF174Q15697 407 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms