RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 WDR19Q8NEZ3 1342 aa12.25□□□□□ -0.45
CALD1-217ENST00000475772 BAZ2BQ9UIF8 2168 aaKnown RBP12.25□□□□□ -0.45
CALD1-217ENST00000475772 RNF223E7ERA6 249 aa12.24□□□□□ -0.45
CALD1-217ENST00000475772 ZMYM6O95789 1325 aa12.24□□□□□ -0.45
CALD1-217ENST00000475772 GGCXP38435 758 aa12.24□□□□□ -0.45
CALD1-217ENST00000475772 PPP2R5BQ15173 497 aa12.24□□□□□ -0.45
CALD1-217ENST00000475772 TMEM67Q5HYA8 995 aa12.24□□□□□ -0.45
CALD1-217ENST00000475772 MFSD6Q6ZSS7 791 aa12.24□□□□□ -0.45
CALD1-217ENST00000475772 SCFD2Q8WU76 684 aa12.24□□□□□ -0.45
CALD1-217ENST00000475772 KAT2BQ92831 832 aa12.24□□□□□ -0.45
CALD1-217ENST00000475772 UHRF1Q96T88 793 aaPredicted RBP12.24□□□□□ -0.45
CALD1-217ENST00000475772 PRDM9Q9NQV7 894 aa12.24□□□□□ -0.45
CALD1-217ENST00000475772 NEDD4P46934 1319 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 LPXNO60711 386 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 KCNQ1P51787 676 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 TAP1Q03518 808 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 PTPN11Q06124 597 aaPredicted RBP12.23□□□□□ -0.45
CALD1-217ENST00000475772 HDAC1Q13547 482 aaPredicted RBP12.23□□□□□ -0.45
CALD1-217ENST00000475772 LY6KQ17RY6 165 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 TCTN1Q2MV58 587 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 USH1GQ495M9 461 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 FAM47CQ5HY64 1035 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 GDF6Q6KF10 455 aaPredicted RBP12.23□□□□□ -0.45
CALD1-217ENST00000475772 DGKHQ86XP1 1220 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 TICAM2Q86XR7 235 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 PHOSPHO2Q8TCD6 241 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 AFG1LQ8WV93 481 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 DHX38Q92620 1227 aaKnown RBP12.23□□□□□ -0.45
CALD1-217ENST00000475772 ANKS1AQ92625 1134 aa12.23□□□□□ -0.45
CALD1-217ENST00000475772 CCDC171Q6TFL3 1326 aa12.22□□□□□ -0.45
CALD1-217ENST00000475772 KPNA6O60684 536 aa12.22□□□□□ -0.45
CALD1-217ENST00000475772 RFC2P35250 354 aa12.22□□□□□ -0.45
CALD1-217ENST00000475772 RRP1P56182 461 aaKnown RBP12.22□□□□□ -0.45
CALD1-217ENST00000475772 ARHGAP1Q07960 439 aa12.22□□□□□ -0.45
CALD1-217ENST00000475772 TMCO2Q7Z6W1 182 aaPredicted RBP12.22□□□□□ -0.45
CALD1-217ENST00000475772 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
CALD1-217ENST00000475772 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
CALD1-217ENST00000475772 SYTL5Q8TDW5 730 aaPredicted RBP12.22□□□□□ -0.45
CALD1-217ENST00000475772 SLC9A7Q96T83 725 aa12.22□□□□□ -0.45
CALD1-217ENST00000475772 LCHNA4D1U4 455 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 MMP3P08254 477 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 PCP11498 1178 aaKnown RBP12.21□□□□□ -0.45
CALD1-217ENST00000475772 ACTN1P12814 892 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 SDSP20132 328 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 MMP16P51512 607 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 PTGISQ16647 500 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 CSPP1Q1MSJ5 1256 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 GPATCH4Q5T3I0 446 aaKnown RBP12.21□□□□□ -0.45
CALD1-217ENST00000475772 SEPT14Q6ZU15 432 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 SESTD1Q86VW0 696 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 HERC6Q8IVU3 1022 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 RETREG2Q8NC44 543 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 LNPKQ9C0E8 428 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 DDX41Q9UJV9 622 aaKnown RBP12.21□□□□□ -0.45
CALD1-217ENST00000475772 PNMA2Q9UL42 364 aa12.21□□□□□ -0.45
CALD1-217ENST00000475772 MYO7AQ13402 2215 aa12.21□□□□□ -0.46
CALD1-217ENST00000475772 LAMA4Q16363 1823 aa12.21□□□□□ -0.46
CALD1-217ENST00000475772 OPLAHO14841 1288 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 NBNO60934 754 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 LILRB3O75022 631 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 GRB10Q13322 594 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 BFSP2Q13515 415 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 CDC37Q16543 378 aaPredicted RBP12.2□□□□□ -0.46
CALD1-217ENST00000475772 QPCTQ16769 361 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 QRICH1Q2TAL8 776 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 BRDTQ58F21 947 aaPredicted RBP12.2□□□□□ -0.46
CALD1-217ENST00000475772 TRAF7Q6Q0C0 670 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 PLEKHM2Q8IWE5 1019 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 PNMA1Q8ND90 353 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 ARNTL2Q8WYA1 636 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 ESR2Q92731 530 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 WNT8BQ93098 351 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 FTOQ9C0B1 505 aaKnown RBP eCLIP12.2□□□□□ -0.46
CALD1-217ENST00000475772 MAF1Q9H063 256 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 JMJD4Q9H9V9 463 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 ZSWIM5Q9P217 1185 aa12.2□□□□□ -0.46
CALD1-217ENST00000475772 ABCB11O95342 1321 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 RAD50Q92878 1312 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 B4E1Z4 1266 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 HAS3O00219 553 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 ZNF213O14771 459 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 RGS20O76081 388 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 DXOO77932 396 aaKnown RBP12.19□□□□□ -0.46
CALD1-217ENST00000475772 GH1P01241 217 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 CXCL10P02778 98 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 CHMP4BP1P59074 171 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 WDR5P61964 334 aaKnown RBP12.19□□□□□ -0.46
CALD1-217ENST00000475772 DEFB103AP81534 67 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 ZNF200P98182 395 aaPredicted RBP12.19□□□□□ -0.46
CALD1-217ENST00000475772 RBL2Q08999 1139 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 TRIM71Q2Q1W2 868 aaKnown RBP12.19□□□□□ -0.46
CALD1-217ENST00000475772 CHST3Q7LGC8 479 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 SMC5Q8IY18 1101 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 NSUN6Q8TEA1 469 aaKnown RBP12.19□□□□□ -0.46
CALD1-217ENST00000475772 IWS1Q96ST2 819 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 OSBPL3Q9H4L5 887 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 RNF41Q9H4P4 317 aaPredicted RBP12.19□□□□□ -0.46
CALD1-217ENST00000475772 VAT1LQ9HCJ6 419 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 HDAC6Q9UBN7 1215 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms