RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CCND2P30279 289 aa14.64□□□□□ -0.07
SKA3-206ENST00000475251 EP400NLQ6ZTU2 488 aa14.64□□□□□ -0.07
SKA3-206ENST00000475251 STOX1Q6ZVD7 989 aa14.64□□□□□ -0.07
SKA3-206ENST00000475251 TMEM192Q8IY95 271 aa14.64□□□□□ -0.07
SKA3-206ENST00000475251 RILPL2Q969X0 211 aa14.64□□□□□ -0.07
SKA3-206ENST00000475251 UBAC1Q9BSL1 405 aa14.64□□□□□ -0.07
SKA3-206ENST00000475251 C16orf70Q9BSU1 422 aa14.64□□□□□ -0.07
SKA3-206ENST00000475251 KRT23Q9C075 422 aa14.64□□□□□ -0.07
SKA3-206ENST00000475251 TUT1Q9H6E5 874 aaKnown RBP14.64□□□□□ -0.07
SKA3-206ENST00000475251 RWDD3Q9Y3V2 267 aa14.64□□□□□ -0.07
SKA3-206ENST00000475251 BRWD1Q9NSI6 2320 aa14.64□□□□□ -0.07
SKA3-206ENST00000475251 NOP56O00567 594 aaKnown RBP14.63□□□□□ -0.07
SKA3-206ENST00000475251 ZBTB5O15062 677 aa14.63□□□□□ -0.07
SKA3-206ENST00000475251 UBA1P22314 1058 aaKnown RBP14.63□□□□□ -0.07
SKA3-206ENST00000475251 PGM5Q15124 567 aa14.63□□□□□ -0.07
SKA3-206ENST00000475251 IMMTQ16891 758 aaKnown RBP14.63□□□□□ -0.07
SKA3-206ENST00000475251 GNPTABQ3T906 1256 aa14.63□□□□□ -0.07
SKA3-206ENST00000475251 TCEAL5Q5H9L2 206 aa14.63□□□□□ -0.07
SKA3-206ENST00000475251 VSIG10LQ86VR7 867 aa14.63□□□□□ -0.07
SKA3-206ENST00000475251 ENAHQ8N8S7 591 aaPredicted RBP14.63□□□□□ -0.07
SKA3-206ENST00000475251 POP1Q99575 1024 aaKnown RBP14.63□□□□□ -0.07
SKA3-206ENST00000475251 USP26Q9BXU7 913 aa14.63□□□□□ -0.07
SKA3-206ENST00000475251 IFIH1Q9BYX4 1025 aaKnown RBP14.63□□□□□ -0.07
SKA3-206ENST00000475251 CNNM2Q9H8M5 875 aa14.63□□□□□ -0.07
SKA3-206ENST00000475251 PCDHA1Q9Y5I3 950 aa14.63□□□□□ -0.07
SKA3-206ENST00000475251 LAMA4Q16363 1823 aa14.63□□□□□ -0.07
SKA3-206ENST00000475251 RALGAPA2Q2PPJ7 1873 aa14.63□□□□□ -0.07
SKA3-206ENST00000475251 POTEB3A0JP26 581 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 B4E1Z4 1266 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 STAM2O75886 525 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 RGS20O76081 388 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 UPP2O95045 317 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 RB1P06400 928 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 SMIM10L2AP0DMW4 78 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 SMIM10L2BP0DMW5 78 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 HOXC8P31273 242 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 ZP2Q05996 745 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 HIC1Q14526 733 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 COL19A1Q14993 1142 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 POTEBQ6S5H4 581 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 ADHFE1Q8IWW8 467 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 FIBCD1Q8N539 461 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 C11orf84Q9BUA3 381 aaPredicted RBP14.62□□□□□ -0.07
SKA3-206ENST00000475251 LMAN2LQ9H0V9 348 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 CLDND1Q9NY35 253 aa14.62□□□□□ -0.07
SKA3-206ENST00000475251 ZNF215Q9UL58 517 aaPredicted RBP14.62□□□□□ -0.07
SKA3-206ENST00000475251 GCOM1H8Y6P7 765 aaPredicted RBP14.61□□□□□ -0.07
SKA3-206ENST00000475251 HIP1O00291 1037 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 OPLAHO14841 1288 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 SORBS3O60504 671 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 LGALS2P05162 132 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 POLR2MP0CAP2 368 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 SDSP20132 328 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 MRE11P49959 708 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 NEDD9Q14511 834 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 IFIT1BQ5T764 474 aaKnown RBP14.61□□□□□ -0.07
SKA3-206ENST00000475251 IL17RAQ96F46 866 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 RNPEPQ9H4A4 650 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 ZSWIM5Q9P217 1185 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 NLRC5Q86WI3 1866 aa14.61□□□□□ -0.07
SKA3-206ENST00000475251 MUC6Q6W4X9 2439 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 C19orf67A6NJJ6 358 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 KLRF2D3W0D1 207 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 C5orf67F2Z3F1 127 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 TREHO43280 583 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 CTSHP09668 335 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 HOXA13P31271 388 aaPredicted RBP14.6□□□□□ -0.07
SKA3-206ENST00000475251 CTNNB1P35222 781 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 SP2Q02086 613 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 HDAC1Q13547 482 aaPredicted RBP14.6□□□□□ -0.07
SKA3-206ENST00000475251 METTL7BQ6UX53 244 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 MTMR8Q96EF0 704 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 MFSD14AQ96MC6 490 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 DSCC1Q9BVC3 393 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 DIAPH3Q9NSV4 1193 aa14.6□□□□□ -0.07
SKA3-206ENST00000475251 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.59□□□□□ -0.07
SKA3-206ENST00000475251 NHLH1Q02575 133 aa14.59□□□□□ -0.07
SKA3-206ENST00000475251 CWC27Q6UX04 472 aaKnown RBP14.59□□□□□ -0.07
SKA3-206ENST00000475251 RPAINQ86UA6 219 aa14.59□□□□□ -0.07
SKA3-206ENST00000475251 PPP2R3CQ969Q6 453 aa14.59□□□□□ -0.07
SKA3-206ENST00000475251 ICAM3P32942 547 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 BMPR1AP36894 532 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 SMAD2Q15796 467 aaKnown RBP14.58□□□□□ -0.08
SKA3-206ENST00000475251 FAM26DQ5JW98 314 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 TAF2Q6P1X5 1199 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 FCHSD1Q86WN1 690 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 HOMER1Q86YM7 354 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 STAG2Q8N3U4 1231 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 IL31RAQ8NI17 732 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 FBXL18Q96ME1 805 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 ADGRA3Q8IWK6 1321 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 NRCAMQ92823 1304 aa14.58□□□□□ -0.08
SKA3-206ENST00000475251 PIEZO1Q92508 2521 aa14.57□□□□□ -0.08
SKA3-206ENST00000475251 FIBPO43427 364 aa14.57□□□□□ -0.08
SKA3-206ENST00000475251 PPP1R11O60927 126 aaPredicted RBP14.57□□□□□ -0.08
SKA3-206ENST00000475251 RPLP2P05387 115 aaKnown RBP14.57□□□□□ -0.08
SKA3-206ENST00000475251 CTC1Q2NKJ3 1217 aa14.57□□□□□ -0.08
SKA3-206ENST00000475251 RSPH3Q86UC2 560 aa14.57□□□□□ -0.08
SKA3-206ENST00000475251 INPP4AQ96PE3 977 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms