RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 FRMPD4Q14CM0 1322 aa28.81■■■□□ 2.2
TMEM54-205ENST00000475208 SMIM10L2AP0DMW4 78 aa28.81■■■□□ 2.2
TMEM54-205ENST00000475208 SMIM10L2BP0DMW5 78 aa28.81■■■□□ 2.2
TMEM54-205ENST00000475208 SART3Q15020 963 aaKnown RBP28.81■■■□□ 2.2
TMEM54-205ENST00000475208 SIP14410 1827 aa28.8■■■□□ 2.2
TMEM54-205ENST00000475208 NOP56O00567 594 aaKnown RBP28.8■■■□□ 2.2
TMEM54-205ENST00000475208 AMHP03971 560 aa28.8■■■□□ 2.2
TMEM54-205ENST00000475208 HOXC8P31273 242 aa28.8■■■□□ 2.2
TMEM54-205ENST00000475208 MRPS9P82933 396 aaKnown RBP28.8■■■□□ 2.2
TMEM54-205ENST00000475208 MKRN4PQ13434 485 aaPredicted RBP28.8■■■□□ 2.2
TMEM54-205ENST00000475208 MYOCDQ8IZQ8 938 aa28.8■■■□□ 2.2
TMEM54-205ENST00000475208 NCOA7Q8NI08 942 aa28.8■■■□□ 2.2
TMEM54-205ENST00000475208 PIBF1Q8WXW3 757 aa28.8■■■□□ 2.2
TMEM54-205ENST00000475208 INSL6Q9Y581 213 aa28.8■■■□□ 2.2
TMEM54-205ENST00000475208 E7EWF7 191 aa28.79■■■□□ 2.2
TMEM54-205ENST00000475208 TREHO43280 583 aa28.79■■■□□ 2.2
TMEM54-205ENST00000475208 CHMLP26374 656 aa28.79■■■□□ 2.2
TMEM54-205ENST00000475208 CATIPQ7Z7H3 387 aa28.79■■■□□ 2.2
TMEM54-205ENST00000475208 INPP4AQ96PE3 977 aaPredicted RBP28.79■■■□□ 2.2
TMEM54-205ENST00000475208 C1QTNF1Q9BXJ1 281 aa28.79■■■□□ 2.2
TMEM54-205ENST00000475208 MICAL3Q7RTP6 2002 aa28.79■■■□□ 2.2
TMEM54-205ENST00000475208 STAM2O75886 525 aa28.78■■■□□ 2.2
TMEM54-205ENST00000475208 ICAM3P32942 547 aa28.78■■■□□ 2.2
TMEM54-205ENST00000475208 SEMA3FQ13275 785 aa28.78■■■□□ 2.2
TMEM54-205ENST00000475208 PLEKHG4Q58EX7 1191 aa28.78■■■□□ 2.2
TMEM54-205ENST00000475208 METTL7BQ6UX53 244 aa28.78■■■□□ 2.2
TMEM54-205ENST00000475208 RNPEPQ9H4A4 650 aa28.78■■■□□ 2.2
TMEM54-205ENST00000475208 NEDD9Q14511 834 aa28.77■■■□□ 2.2
TMEM54-205ENST00000475208 CYFIP1Q7L576 1253 aa28.77■■■□□ 2.2
TMEM54-205ENST00000475208 USP26Q9BXU7 913 aa28.77■■■□□ 2.2
TMEM54-205ENST00000475208 RTEL1Q9NZ71 1219 aa28.77■■■□□ 2.2
TMEM54-205ENST00000475208 SPATA31C2B4DYI2 1134 aa28.76■■■□□ 2.19
TMEM54-205ENST00000475208 FIBPO43427 364 aa28.76■■■□□ 2.19
TMEM54-205ENST00000475208 CTSHP09668 335 aa28.76■■■□□ 2.19
TMEM54-205ENST00000475208 ANTXR2P58335 489 aa28.76■■■□□ 2.19
TMEM54-205ENST00000475208 HTRA4P83105 476 aaPredicted RBP28.76■■■□□ 2.19
TMEM54-205ENST00000475208 FBXO22Q8NEZ5 403 aa28.76■■■□□ 2.19
TMEM54-205ENST00000475208 GPR20Q99678 358 aa28.76■■■□□ 2.19
TMEM54-205ENST00000475208 C17orf80Q9BSJ5 609 aa28.76■■■□□ 2.19
TMEM54-205ENST00000475208 BRWD1Q9NSI6 2320 aa28.75■■■□□ 2.19
TMEM54-205ENST00000475208 CAND2O75155 1236 aa28.75■■■□□ 2.19
TMEM54-205ENST00000475208 TRIM50Q86XT4 487 aa28.75■■■□□ 2.19
TMEM54-205ENST00000475208 SEPT8Q92599 483 aa28.75■■■□□ 2.19
TMEM54-205ENST00000475208 DOCK5Q9H7D0 1870 aa28.74■■■□□ 2.19
TMEM54-205ENST00000475208 MB21D2Q8IYB1 491 aaPredicted RBP28.74■■■□□ 2.19
TMEM54-205ENST00000475208 SMARCC2Q8TAQ2 1214 aa28.74■■■□□ 2.19
TMEM54-205ENST00000475208 SP7Q8TDD2 431 aaPredicted RBP28.74■■■□□ 2.19
TMEM54-205ENST00000475208 IGDCC4Q8TDY8 1250 aa28.74■■■□□ 2.19
TMEM54-205ENST00000475208 OSBPL7Q9BZF2 842 aa28.74■■■□□ 2.19
TMEM54-205ENST00000475208 UBE2ZQ9H832 354 aaPredicted RBP28.74■■■□□ 2.19
TMEM54-205ENST00000475208 SETD4Q9NVD3 440 aa28.74■■■□□ 2.19
TMEM54-205ENST00000475208 SGSM2O43147 1006 aa28.73■■■□□ 2.19
TMEM54-205ENST00000475208 GNAT1P11488 350 aa28.73■■■□□ 2.19
TMEM54-205ENST00000475208 UTP14CQ5TAP6 766 aaKnown RBP28.73■■■□□ 2.19
TMEM54-205ENST00000475208 CUL5Q93034 780 aa28.73■■■□□ 2.19
TMEM54-205ENST00000475208 MYL10Q9BUA6 226 aa28.73■■■□□ 2.19
TMEM54-205ENST00000475208 SPZ1Q9BXG8 430 aa28.73■■■□□ 2.19
TMEM54-205ENST00000475208 EPHX3Q9H6B9 360 aa28.73■■■□□ 2.19
TMEM54-205ENST00000475208 ZNF215Q9UL58 517 aaPredicted RBP28.73■■■□□ 2.19
TMEM54-205ENST00000475208 TELO2Q9Y4R8 837 aa28.73■■■□□ 2.19
TMEM54-205ENST00000475208 SP4Q02446 784 aa28.72■■■□□ 2.19
TMEM54-205ENST00000475208 USP17L6PQ6QN14 398 aa28.72■■■□□ 2.19
TMEM54-205ENST00000475208 ZNF654Q8IZM8 581 aa28.72■■■□□ 2.19
TMEM54-205ENST00000475208 CTCFLQ8NI51 663 aaPredicted RBP28.72■■■□□ 2.19
TMEM54-205ENST00000475208 RRP36Q96EU6 259 aaKnown RBP28.72■■■□□ 2.19
TMEM54-205ENST00000475208 PCNX4Q63HM2 1172 aa28.71■■■□□ 2.19
TMEM54-205ENST00000475208 YME1L1Q96TA2 773 aa28.71■■■□□ 2.19
TMEM54-205ENST00000475208 MAP3K14Q99558 947 aa28.71■■■□□ 2.19
TMEM54-205ENST00000475208 LY9Q9HBG7 655 aa28.71■■■□□ 2.19
TMEM54-205ENST00000475208 DDAH1O94760 285 aa28.7■■■□□ 2.18
TMEM54-205ENST00000475208 KIF5BP33176 963 aa28.7■■■□□ 2.18
TMEM54-205ENST00000475208 ARHGAP4P98171 946 aa28.7■■■□□ 2.18
TMEM54-205ENST00000475208 XRRA1Q6P2D8 792 aa28.7■■■□□ 2.18
TMEM54-205ENST00000475208 LMBR1Q8WVP7 490 aa28.7■■■□□ 2.18
TMEM54-205ENST00000475208 TOP1MTQ969P6 601 aa28.7■■■□□ 2.18
TMEM54-205ENST00000475208 SENP7Q9BQF6 1050 aa28.7■■■□□ 2.18
TMEM54-205ENST00000475208 SEC63Q9UGP8 760 aaKnown RBP28.7■■■□□ 2.18
TMEM54-205ENST00000475208 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.69■■■□□ 2.18
TMEM54-205ENST00000475208 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.69■■■□□ 2.18
TMEM54-205ENST00000475208 PIK3CDO00329 1044 aa28.69■■■□□ 2.18
TMEM54-205ENST00000475208 MEIS2O14770 477 aa28.69■■■□□ 2.18
TMEM54-205ENST00000475208 UPP2O95045 317 aa28.69■■■□□ 2.18
TMEM54-205ENST00000475208 ADAM17P78536 824 aa28.69■■■□□ 2.18
TMEM54-205ENST00000475208 EPC2Q52LR7 807 aa28.69■■■□□ 2.18
TMEM54-205ENST00000475208 NLRX1Q86UT6 975 aa28.69■■■□□ 2.18
TMEM54-205ENST00000475208 MAP4K1Q92918 833 aa28.69■■■□□ 2.18
TMEM54-205ENST00000475208 SAMD11Q96NU1 681 aa28.69■■■□□ 2.18
TMEM54-205ENST00000475208 RBM8AQ9Y5S9 174 aaKnown RBP28.69■■■□□ 2.18
TMEM54-205ENST00000475208 KCNA5P22460 613 aa28.68■■■□□ 2.18
TMEM54-205ENST00000475208 KHSRPQ92945 711 aaKnown RBP eCLIP28.68■■■□□ 2.18
TMEM54-205ENST00000475208 MRPL38Q96DV4 380 aaKnown RBP28.68■■■□□ 2.18
TMEM54-205ENST00000475208 COL4A6Q14031 1691 aa28.67■■■□□ 2.18
TMEM54-205ENST00000475208 SMARCA1P28370 1054 aa28.67■■■□□ 2.18
TMEM54-205ENST00000475208 PLA2G5P39877 138 aa28.67■■■□□ 2.18
TMEM54-205ENST00000475208 PTPROQ16827 1216 aa28.67■■■□□ 2.18
TMEM54-205ENST00000475208 LEXMQ3ZCV2 418 aa28.67■■■□□ 2.18
TMEM54-205ENST00000475208 FAM26DQ5JW98 314 aa28.67■■■□□ 2.18
TMEM54-205ENST00000475208 CASC1Q6TDU7 716 aa28.67■■■□□ 2.18
TMEM54-205ENST00000475208 APBB2Q92870 758 aa28.67■■■□□ 2.18
TMEM54-205ENST00000475208 LRFN3Q9BTN0 628 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms