RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 C17orf102A2RUQ5 167 aa23.46■■□□□ 1.35
APP-215ENST00000474136 C19orf67A6NJJ6 358 aa23.46■■□□□ 1.35
APP-215ENST00000474136 TREHO43280 583 aa23.46■■□□□ 1.35
APP-215ENST00000474136 IL31RAQ8NI17 732 aa23.46■■□□□ 1.35
APP-215ENST00000474136 SEPT8Q92599 483 aa23.46■■□□□ 1.35
APP-215ENST00000474136 GPKOWQ92917 476 aaPredicted RBP eCLIP23.46■■□□□ 1.35
APP-215ENST00000474136 ATP6V0A1Q93050 837 aa23.46■■□□□ 1.35
APP-215ENST00000474136 PDCD2LQ9BRP1 358 aa23.46■■□□□ 1.35
APP-215ENST00000474136 RNF41Q9H4P4 317 aaPredicted RBP23.46■■□□□ 1.35
APP-215ENST00000474136 KDM4AO75164 1064 aa23.45■■□□□ 1.34
APP-215ENST00000474136 UBA1P22314 1058 aaKnown RBP23.45■■□□□ 1.34
APP-215ENST00000474136 LTBRP36941 435 aa23.45■■□□□ 1.34
APP-215ENST00000474136 HSD17B4P51659 736 aa23.45■■□□□ 1.34
APP-215ENST00000474136 ASPRV1Q53RT3 343 aa23.45■■□□□ 1.34
APP-215ENST00000474136 HFE2Q6ZVN8 426 aa23.45■■□□□ 1.34
APP-215ENST00000474136 RPAINQ86UA6 219 aa23.45■■□□□ 1.34
APP-215ENST00000474136 TICAM2Q86XR7 235 aa23.45■■□□□ 1.34
APP-215ENST00000474136 ADHFE1Q8IWW8 467 aa23.45■■□□□ 1.34
APP-215ENST00000474136 BCAS3Q9H6U6 928 aa23.45■■□□□ 1.34
APP-215ENST00000474136 PRKAG3Q9UGI9 489 aa23.45■■□□□ 1.34
APP-215ENST00000474136 SMIM10L2AP0DMW4 78 aa23.44■■□□□ 1.34
APP-215ENST00000474136 SMIM10L2BP0DMW5 78 aa23.44■■□□□ 1.34
APP-215ENST00000474136 IRS1P35568 1242 aa23.44■■□□□ 1.34
APP-215ENST00000474136 CLUL1Q15846 466 aa23.44■■□□□ 1.34
APP-215ENST00000474136 IFIH1Q9BYX4 1025 aaKnown RBP23.44■■□□□ 1.34
APP-215ENST00000474136 FAM50BQ9Y247 325 aa23.44■■□□□ 1.34
APP-215ENST00000474136 HOXA13P31271 388 aaPredicted RBP23.43■■□□□ 1.34
APP-215ENST00000474136 HOXC8P31273 242 aa23.43■■□□□ 1.34
APP-215ENST00000474136 RNPEPQ9H4A4 650 aa23.43■■□□□ 1.34
APP-215ENST00000474136 MYH7BA7E2Y1 1941 aa23.43■■□□□ 1.34
APP-215ENST00000474136 H3BRB1 525 aa23.42■■□□□ 1.34
APP-215ENST00000474136 PPP1R11O60927 126 aaPredicted RBP23.42■■□□□ 1.34
APP-215ENST00000474136 PARP1P09874 1014 aaKnown RBP23.42■■□□□ 1.34
APP-215ENST00000474136 DLX2Q07687 328 aaPredicted RBP23.42■■□□□ 1.34
APP-215ENST00000474136 PGM5Q15124 567 aa23.42■■□□□ 1.34
APP-215ENST00000474136 VSIG10LQ86VR7 867 aa23.42■■□□□ 1.34
APP-215ENST00000474136 IQCA1Q86XH1 822 aa23.42■■□□□ 1.34
APP-215ENST00000474136 STAG2Q8N3U4 1231 aa23.42■■□□□ 1.34
APP-215ENST00000474136 ENAHQ8N8S7 591 aaPredicted RBP23.42■■□□□ 1.34
APP-215ENST00000474136 ZSCAN10Q96SZ4 725 aaPredicted RBP23.42■■□□□ 1.34
APP-215ENST00000474136 TUT1Q9H6E5 874 aaKnown RBP23.42■■□□□ 1.34
APP-215ENST00000474136 MLXIPQ9HAP2 919 aa23.42■■□□□ 1.34
APP-215ENST00000474136 B4E1Z4 1266 aa23.41■■□□□ 1.34
APP-215ENST00000474136 ZNF213O14771 459 aa23.41■■□□□ 1.34
APP-215ENST00000474136 EIF5BO60841 1220 aaKnown RBP23.41■■□□□ 1.34
APP-215ENST00000474136 LGALS2P05162 132 aa23.41■■□□□ 1.34
APP-215ENST00000474136 CTNNB1P35222 781 aa23.41■■□□□ 1.34
APP-215ENST00000474136 GHRHRQ02643 423 aa23.41■■□□□ 1.34
APP-215ENST00000474136 KCNV1Q6PIU1 500 aa23.41■■□□□ 1.34
APP-215ENST00000474136 STOX1Q6ZVD7 989 aa23.41■■□□□ 1.34
APP-215ENST00000474136 AMNQ9BXJ7 453 aa23.41■■□□□ 1.34
APP-215ENST00000474136 KCNH6Q9H252 994 aa23.41■■□□□ 1.34
APP-215ENST00000474136 MUTYHQ9UIF7 546 aa23.41■■□□□ 1.34
APP-215ENST00000474136 C5orf42Q9H799 3197 aa23.41■■□□□ 1.34
APP-215ENST00000474136 TRIM6-TRIM34B2RNG4 842 aa23.4■■□□□ 1.34
APP-215ENST00000474136 GRM6O15303 877 aa23.4■■□□□ 1.34
APP-215ENST00000474136 CSPG5O95196 566 aa23.4■■□□□ 1.34
APP-215ENST00000474136 GSPT1P15170 499 aaKnown RBP23.4■■□□□ 1.34
APP-215ENST00000474136 HYAL1Q12794 435 aa23.4■■□□□ 1.34
APP-215ENST00000474136 CTC1Q2NKJ3 1217 aa23.4■■□□□ 1.34
APP-215ENST00000474136 CCDC178Q5BJE1 867 aa23.4■■□□□ 1.34
APP-215ENST00000474136 SETD4Q9NVD3 440 aa23.4■■□□□ 1.34
APP-215ENST00000474136 ZNF318Q5VUA4 2279 aa23.39■■□□□ 1.34
APP-215ENST00000474136 LINC00271P0C7V0 271 aa23.39■■□□□ 1.34
APP-215ENST00000474136 SMAD2Q15796 467 aaKnown RBP23.39■■□□□ 1.34
APP-215ENST00000474136 FIBCD1Q8N539 461 aa23.39■■□□□ 1.34
APP-215ENST00000474136 IL17RAQ96F46 866 aa23.39■■□□□ 1.34
APP-215ENST00000474136 PHOX2BQ99453 314 aa23.39■■□□□ 1.34
APP-215ENST00000474136 UPF3BQ9BZI7 483 aaKnown RBP23.39■■□□□ 1.34
APP-215ENST00000474136 ZSWIM5Q9P217 1185 aa23.39■■□□□ 1.34
APP-215ENST00000474136 COL4A6Q14031 1691 aa23.39■■□□□ 1.33
APP-215ENST00000474136 TRIOO75962 3097 aa23.38■■□□□ 1.33
APP-215ENST00000474136 MBTPS2O43462 519 aa23.38■■□□□ 1.33
APP-215ENST00000474136 TGFB3P10600 412 aa23.38■■□□□ 1.33
APP-215ENST00000474136 SDSP20132 328 aa23.38■■□□□ 1.33
APP-215ENST00000474136 GTF2F1P35269 517 aaKnown RBP eCLIP23.38■■□□□ 1.33
APP-215ENST00000474136 CASC1Q6TDU7 716 aa23.38■■□□□ 1.33
APP-215ENST00000474136 RILPL2Q969X0 211 aa23.38■■□□□ 1.33
APP-215ENST00000474136 PCDHA1Q9Y5I3 950 aa23.38■■□□□ 1.33
APP-215ENST00000474136 C5orf67F2Z3F1 127 aa23.37■■□□□ 1.33
APP-215ENST00000474136 CAND2O75155 1236 aa23.37■■□□□ 1.33
APP-215ENST00000474136 BMPR1AP36894 532 aa23.37■■□□□ 1.33
APP-215ENST00000474136 FCHSD1Q86WN1 690 aa23.37■■□□□ 1.33
APP-215ENST00000474136 TRIM50Q86XT4 487 aa23.37■■□□□ 1.33
APP-215ENST00000474136 TELO2Q9Y4R8 837 aa23.37■■□□□ 1.33
APP-215ENST00000474136 HIP1O00291 1037 aa23.36■■□□□ 1.33
APP-215ENST00000474136 NCK2O43639 380 aa23.36■■□□□ 1.33
APP-215ENST00000474136 TBX10O75333 385 aa23.36■■□□□ 1.33
APP-215ENST00000474136 CCND2P30279 289 aa23.36■■□□□ 1.33
APP-215ENST00000474136 HERC4Q5GLZ8 1057 aaPredicted RBP23.36■■□□□ 1.33
APP-215ENST00000474136 RNF135Q8IUD6 432 aa23.36■■□□□ 1.33
APP-215ENST00000474136 APBB2Q92870 758 aa23.36■■□□□ 1.33
APP-215ENST00000474136 MTMR8Q96EF0 704 aa23.36■■□□□ 1.33
APP-215ENST00000474136 MFSD14AQ96MC6 490 aa23.36■■□□□ 1.33
APP-215ENST00000474136 IGFLR1Q9H665 355 aa23.36■■□□□ 1.33
APP-215ENST00000474136 MAP3K20Q9NYL2 800 aaKnown RBP23.36■■□□□ 1.33
APP-215ENST00000474136 KLRF2D3W0D1 207 aa23.35■■□□□ 1.33
APP-215ENST00000474136 NOP56O00567 594 aaKnown RBP23.35■■□□□ 1.33
APP-215ENST00000474136 ZBTB5O15062 677 aa23.35■■□□□ 1.33
APP-215ENST00000474136 LINC01565O15544 149 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms