RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 SMARCA1P28370 1054 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 KIF5BP33176 963 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 THPOP40225 353 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 NEDD9Q14511 834 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 USP17L6PQ6QN14 398 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 CASC1Q6TDU7 716 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 CYFIP1Q7L576 1253 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 SERINC5Q86VE9 423 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 ZNF654Q8IZM8 581 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 CTCFLQ8NI51 663 aaPredicted RBP13.88□□□□□ -0.19
COL16A1-210ENST00000474000 SMARCC2Q8TAQ2 1214 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 ATP6V0A1Q93050 837 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 HLA-CQ95604 372 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 RAD9AQ99638 391 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 LRFN3Q9BTN0 628 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 SPZ1Q9BXG8 430 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 USP26Q9BXU7 913 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 RNPEPQ9H4A4 650 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 TET1Q8NFU7 2136 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 FRMPD4Q14CM0 1322 aa13.88□□□□□ -0.19
COL16A1-210ENST00000474000 NOP56O00567 594 aaKnown RBP13.87□□□□□ -0.19
COL16A1-210ENST00000474000 PRC1O43663 620 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 EFCAB14O75071 495 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 LGR5O75473 907 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 DDAH1O94760 285 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 SMIM10L2AP0DMW4 78 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 SMIM10L2BP0DMW5 78 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 SEMA3FQ13275 785 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 METTL7BQ6UX53 244 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 TMTC2Q8N394 836 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 KHSRPQ92945 711 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL16A1-210ENST00000474000 CUL5Q93034 780 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 GPR20Q99678 358 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 LZTS2Q9BRK4 669 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 MTA3Q9BTC8 594 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 LAMA4Q16363 1823 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 EMSYQ7Z589 1322 aa13.87□□□□□ -0.19
COL16A1-210ENST00000474000 PIK3CDO00329 1044 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 MEIS2O14770 477 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 TREHO43280 583 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 FIBPO43427 364 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 HOXC8P31273 242 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 MCM5P33992 734 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 GNAQP50148 359 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 PCNX4Q63HM2 1172 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 FAM117BQ6P1L5 589 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 XRRA1Q6P2D8 792 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL16A1-210ENST00000474000 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 CMTR1Q8N1G2 835 aaKnown RBP13.86□□□□□ -0.19
COL16A1-210ENST00000474000 SRBD1Q8N5C6 995 aaKnown RBP13.86□□□□□ -0.19
COL16A1-210ENST00000474000 DBF4BQ8NFT6 615 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 LSG1Q9H089 658 aaKnown RBP13.86□□□□□ -0.19
COL16A1-210ENST00000474000 SETD4Q9NVD3 440 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 SEC63Q9UGP8 760 aaKnown RBP13.86□□□□□ -0.19
COL16A1-210ENST00000474000 TELO2Q9Y4R8 837 aa13.86□□□□□ -0.19
COL16A1-210ENST00000474000 CCDC69A6NI79 296 aa13.85□□□□□ -0.19
COL16A1-210ENST00000474000 SH2B2O14492 632 aaPredicted RBP13.85□□□□□ -0.19
COL16A1-210ENST00000474000 PLEKHA8P1O95397 391 aa13.85□□□□□ -0.19
COL16A1-210ENST00000474000 COL9A3Q14050 684 aaPredicted RBP13.85□□□□□ -0.19
COL16A1-210ENST00000474000 GDPD5Q8WTR4 605 aa13.85□□□□□ -0.19
COL16A1-210ENST00000474000 TMEM87BQ96K49 555 aa13.85□□□□□ -0.19
COL16A1-210ENST00000474000 SENP7Q9BQF6 1050 aa13.85□□□□□ -0.19
COL16A1-210ENST00000474000 PSTPIP2Q9H939 334 aa13.85□□□□□ -0.19
COL16A1-210ENST00000474000 SUGCTQ9HAC7 445 aa13.85□□□□□ -0.19
COL16A1-210ENST00000474000 MTUS1Q9ULD2 1270 aa13.85□□□□□ -0.19
COL16A1-210ENST00000474000 TRIP12Q14669 1992 aaPredicted RBP13.85□□□□□ -0.19
COL16A1-210ENST00000474000 LINC01553A4QN01 128 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 SLC27A2O14975 620 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 AMHP03971 560 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 GNAT1P11488 350 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 RXRAP19793 462 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
COL16A1-210ENST00000474000 LIFRP42702 1097 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 ERVK-21P61565 698 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 SP4Q02446 784 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
COL16A1-210ENST00000474000 PLEKHG4Q58EX7 1191 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 UTP14CQ5TAP6 766 aaKnown RBP13.84□□□□□ -0.19
COL16A1-210ENST00000474000 NLRX1Q86UT6 975 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 TRIM50Q86XT4 487 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 TGS1Q96RS0 853 aaKnown RBP13.84□□□□□ -0.19
COL16A1-210ENST00000474000 CD320Q9NPF0 282 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 LMCD1Q9NZU5 365 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 INSL6Q9Y581 213 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 SLC12A7Q9Y666 1083 aa13.84□□□□□ -0.19
COL16A1-210ENST00000474000 TANC1Q9C0D5 1861 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 ATP9AO75110 1047 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 CAND2O75155 1236 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 CALM1P0DP23 149 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 CALM2P0DP24 149 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 CALM3P0DP25 149 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 NECTIN1Q15223 517 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 TMEM31Q5JXX7 168 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 CREB3L3Q68CJ9 461 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 MYOCDQ8IZQ8 938 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 CCDC82Q8N4S0 544 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 FANCBQ8NB91 859 aa13.83□□□□□ -0.2
COL16A1-210ENST00000474000 GIMAP8Q8ND71 665 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms