RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PSMC6P62333 389 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 PURAQ00577 322 aaKnown RBP14.97□□□□□ -0.01
TPM3-216ENST00000473036 SHHQ15465 462 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 KAT2BQ92831 832 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 TNFRSF25Q93038 417 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 LENG9Q96B70 501 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 UIMC1Q96RL1 719 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 LLPHQ9BRT6 129 aaKnown RBP14.97□□□□□ -0.01
TPM3-216ENST00000473036 SPC25Q9HBM1 224 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 PRDM6Q9NQX0 595 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 ATP11BQ9Y2G3 1177 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 FIBPO43427 364 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 ST18O60284 1047 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 HOXD8P13378 290 aaPredicted RBP14.96□□□□□ -0.01
TPM3-216ENST00000473036 NR5A1Q13285 461 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 TRIM60Q495X7 471 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 CEP55Q53EZ4 464 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 CYFIP1Q7L576 1253 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 SLC43A3Q8NBI5 491 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 PCSK9Q8NBP7 692 aaKnown RBP14.96□□□□□ -0.01
TPM3-216ENST00000473036 GPRASP2Q96D09 838 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 FAM161BQ96MY7 647 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 KCNH7Q9NS40 1196 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 PKD2L1Q9P0L9 805 aa14.96□□□□□ -0.01
TPM3-216ENST00000473036 RBAK-RBAKDNI3L0D1 243 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 MYL3P08590 195 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 CPT1AP50416 773 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 GUCY1B3Q02153 619 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 ITGB3BPQ13352 177 aaPredicted RBP14.95□□□□□ -0.02
TPM3-216ENST00000473036 MTMR1Q13613 665 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 LAMC2Q13753 1193 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 GNPTABQ3T906 1256 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 KCNV1Q6PIU1 500 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 DHX37Q8IY37 1157 aaKnown RBP14.95□□□□□ -0.02
TPM3-216ENST00000473036 PPTC7Q8NI37 304 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 BICD2Q8TD16 824 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 TBCKQ8TEA7 893 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 SENP7Q9BQF6 1050 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 AGO4Q9HCK5 861 aaKnown RBP14.95□□□□□ -0.02
TPM3-216ENST00000473036 STARD7Q9NQZ5 370 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 PDLIM7Q9NR12 457 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 MUC3AQ02505 3323 aa14.95□□□□□ -0.02
TPM3-216ENST00000473036 ELP1O95163 1332 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 WNT7AO00755 349 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 DHX15O43143 795 aaKnown RBP14.94□□□□□ -0.02
TPM3-216ENST00000473036 CIITAP33076 1130 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 TLE2Q04725 743 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 KRT40Q6A162 431 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 GALNT17Q6IS24 598 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 SH3RF1Q7Z6J0 888 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 NLRX1Q86UT6 975 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 FAM177A1Q8N128 213 aaPredicted RBP14.94□□□□□ -0.02
TPM3-216ENST00000473036 BADQ92934 168 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 GLT1D1Q96MS3 346 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 SPATA33Q96N06 139 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 GPR20Q99678 358 aa14.94□□□□□ -0.02
TPM3-216ENST00000473036 TRIP12Q14669 1992 aaPredicted RBP14.94□□□□□ -0.02
TPM3-216ENST00000473036 GSTTP1A0A1W2PQM5 241 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 BTBD18B2RXH4 712 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 ARVCFO00192 962 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 TDP2O95551 362 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 MMP1P03956 469 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 ZNF286BP0CG31 522 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 FOSL2P15408 326 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 ITGB8P26012 769 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 MCM2P49736 904 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 FAAP100Q0VG06 881 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 HIC1Q14526 733 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 INF2Q27J81 1249 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 C9orf50Q5SZB4 431 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 METTL7BQ6UX53 244 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 WASF1Q92558 559 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 GJA10Q969M2 543 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 C16orf70Q9BSU1 422 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 MTG1Q9BT17 334 aaPredicted RBP14.93□□□□□ -0.02
TPM3-216ENST00000473036 EHMT1Q9H9B1 1298 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 PRDM5Q9NQX1 630 aaPredicted RBP14.93□□□□□ -0.02
TPM3-216ENST00000473036 WDR81Q562E7 1941 aa14.93□□□□□ -0.02
TPM3-216ENST00000473036 A0A0U1RQG5 324 aaPredicted RBP14.92□□□□□ -0.02
TPM3-216ENST00000473036 TRIM43BA6NCK2 446 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 KIAA0355O15063 1070 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 CUL4AQ13619 759 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 ITGA7Q13683 1181 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 NEDD9Q14511 834 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 NBPF20Q3BBV1 942 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 MCTP2Q6DN12 878 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 NIPA1Q7RTP0 329 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 ANKRD33Q7Z3H0 272 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 PLA2G4DQ86XP0 818 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 TRIM43Q96BQ3 446 aaPredicted RBP14.92□□□□□ -0.02
TPM3-216ENST00000473036 MBOAT7Q96N66 472 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 CTAGE1Q96RT6 745 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 TTYH1Q9H313 450 aaPredicted RBP14.92□□□□□ -0.02
TPM3-216ENST00000473036 MLXIPQ9HAP2 919 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 POLR3EQ9NVU0 708 aa14.92□□□□□ -0.02
TPM3-216ENST00000473036 CYP3A7-CYP3A51PA0A087WV96 503 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 KIF28PB7ZC32 967 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 HAS3O00219 553 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 MSH4O15457 936 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 MAFGO15525 162 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms