RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 SYNRGQ9UMZ2 1314 aa14.58□□□□□ -0.08
SEC16A-209ENST00000472305 KIAA0100Q14667 2235 aaKnown RBP14.57□□□□□ -0.08
SEC16A-209ENST00000472305 MAFGO15525 162 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 ADAMTS4O75173 837 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 FARP2O94887 1054 aaPredicted RBP14.57□□□□□ -0.08
SEC16A-209ENST00000472305 SGPL1O95470 568 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 GH1P01241 217 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
SEC16A-209ENST00000472305 GJB1P08034 283 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 TGFB3P10600 412 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 TRAPPC10P48553 1259 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 GJA9P57773 515 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 SETQ01105 290 aaPredicted RBP14.57□□□□□ -0.08
SEC16A-209ENST00000472305 SP4Q02446 784 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 RILPL1Q5EBL4 403 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 TLK2Q86UE8 772 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 DHX37Q8IY37 1157 aaKnown RBP14.57□□□□□ -0.08
SEC16A-209ENST00000472305 U2AF1L4Q8WU68 220 aaKnown RBP14.57□□□□□ -0.08
SEC16A-209ENST00000472305 AFG1LQ8WV93 481 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 SLC5A5Q92911 643 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 MTMR9Q96QG7 549 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 SENP7Q9BQF6 1050 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 KCNMB3Q9NPA1 279 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 XPNPEP3Q9NQH7 507 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 CLIC4Q9Y696 253 aa14.57□□□□□ -0.08
SEC16A-209ENST00000472305 COL6A3P12111 3177 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 IPO5O00410 1097 aaKnown RBP14.56□□□□□ -0.08
SEC16A-209ENST00000472305 CCNE2O96020 404 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 GCFC2P16383 781 aaKnown RBP14.56□□□□□ -0.08
SEC16A-209ENST00000472305 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
SEC16A-209ENST00000472305 NEDD9Q14511 834 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 HSDL1Q3SXM5 330 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 KCNV1Q6PIU1 500 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 KLHDC9Q8NEP7 349 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 CDHR1Q96JP9 859 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 USP28Q96RU2 1077 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 NAP1L4Q99733 375 aaKnown RBP14.56□□□□□ -0.08
SEC16A-209ENST00000472305 CRISPLD2Q9H0B8 497 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 UPF3AQ9H1J1 476 aaKnown RBP14.56□□□□□ -0.08
SEC16A-209ENST00000472305 ZSCAN16Q9H4T2 348 aaPredicted RBP14.56□□□□□ -0.08
SEC16A-209ENST00000472305 MLXIPQ9HAP2 919 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 OGDHLQ9ULD0 1010 aa14.56□□□□□ -0.08
SEC16A-209ENST00000472305 GSTTP1A0A1W2PQM5 241 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 NKRFO15226 690 aaKnown RBP eCLIP14.55□□□□□ -0.08
SEC16A-209ENST00000472305 NEMFO60524 1076 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 PSMD10O75832 226 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 C6orf222P0C671 652 aaPredicted RBP14.55□□□□□ -0.08
SEC16A-209ENST00000472305 CEBPZQ03701 1054 aaKnown RBP14.55□□□□□ -0.08
SEC16A-209ENST00000472305 LRRC41Q15345 812 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 SF3A1Q15459 793 aaKnown RBP14.55□□□□□ -0.08
SEC16A-209ENST00000472305 IL17AQ16552 155 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 CCSAPQ6IQ19 270 aaPredicted RBP14.55□□□□□ -0.08
SEC16A-209ENST00000472305 METTL7BQ6UX53 244 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 SPATA33Q96N06 139 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 TMEM106CQ9BVX2 250 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 AP5M1Q9H0R1 490 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 TFIP11Q9UBB9 837 aaKnown RBP14.55□□□□□ -0.08
SEC16A-209ENST00000472305 Q9Y3F1 56 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 NFASCO94856 1347 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 BRCA2P51587 3418 aa14.55□□□□□ -0.08
SEC16A-209ENST00000472305 KIAA1217Q5T5P2 1943 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 MSCO60682 206 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 TFRCP02786 760 aaKnown RBP14.54□□□□□ -0.08
SEC16A-209ENST00000472305 MMP3P08254 477 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 EN2P19622 333 aaPredicted RBP14.54□□□□□ -0.08
SEC16A-209ENST00000472305 TXKP42681 527 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 GJA8P48165 433 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 DNM1Q05193 864 aaKnown RBP14.54□□□□□ -0.08
SEC16A-209ENST00000472305 PTGDRQ13258 359 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 LAMC2Q13753 1193 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 PTPAQ15257 358 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 CALCRLQ16602 461 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 LRCH2Q5VUJ6 765 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 EMID1Q96A84 441 aaPredicted RBP14.54□□□□□ -0.08
SEC16A-209ENST00000472305 GPR20Q99678 358 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 SDF4Q9BRK5 362 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 UNC45AQ9H3U1 944 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 JPH1Q9HDC5 661 aaPredicted RBP14.54□□□□□ -0.08
SEC16A-209ENST00000472305 SLC9A2Q9UBY0 812 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 VAV3Q9UKW4 847 aa14.54□□□□□ -0.08
SEC16A-209ENST00000472305 RANBP2P49792 3224 aaKnown RBP14.54□□□□□ -0.08
SEC16A-209ENST00000472305 A6NJR5 290 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 EML1O00423 815 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 CHMP2AO43633 222 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 MARCH6O60337 910 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 GAS7O60861 476 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 OR52Z1P0C646 297 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 PDIA4P13667 645 aaKnown RBP14.53□□□□□ -0.08
SEC16A-209ENST00000472305 ACTR2P61160 394 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 NKX3-2P78367 333 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 NUCB2P80303 420 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 KCNA10Q16322 511 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 FSCN1Q16658 493 aaKnown RBP14.53□□□□□ -0.08
SEC16A-209ENST00000472305 B3GNT9Q6UX72 402 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 DIS3LQ8TF46 1054 aaKnown RBP14.53□□□□□ -0.08
SEC16A-209ENST00000472305 PPP1R13LQ8WUF5 828 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 PCYT2Q99447 389 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 TEKT3Q9BXF9 490 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 TBC1D22BQ9NU19 505 aa14.53□□□□□ -0.08
SEC16A-209ENST00000472305 TBX3O15119 743 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms