RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 HSDL1Q3SXM5 330 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 TMEM31Q5JXX7 168 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 CELF3Q5SZQ8 465 aaKnown RBP10.48□□□□□ -0.73
SF3A1-206ENST00000471037 IFIT1BQ5T764 474 aaKnown RBP10.48□□□□□ -0.73
SF3A1-206ENST00000471037 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
SF3A1-206ENST00000471037 SPATA33Q96N06 139 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 UBAC1Q9BSL1 405 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 C16orf70Q9BSU1 422 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 UBE2ZQ9H832 354 aaPredicted RBP10.48□□□□□ -0.73
SF3A1-206ENST00000471037 VAT1LQ9HCJ6 419 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 MTUS1Q9ULD2 1270 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 INSL6Q9Y581 213 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 SNX14Q9Y5W7 946 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 MYH6P13533 1939 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 PALM3A6NDB9 673 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-206ENST00000471037 RSPH10B2B2RC85 870 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 KLRF2D3W0D1 207 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 GPR37L1O60883 481 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 CAND2O75155 1236 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 GGPS1O95749 300 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 RSPH10BP0C881 870 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 MYCLP12524 364 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-206ENST00000471037 PSMA5P28066 241 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 ZNF200P98182 395 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-206ENST00000471037 SP2Q02086 613 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 TRAF1Q13077 416 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 RABEP1Q15276 862 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 PLEKHG4Q58EX7 1191 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 RASEFQ8IZ41 740 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 DBF4BQ8NFT6 615 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 IL31RAQ8NI17 732 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.73
SF3A1-206ENST00000471037 TM6SF1Q9BZW5 370 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 C11orf16Q9NQ32 467 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 MAD2L2Q9UI95 211 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 HCN4Q9Y3Q4 1203 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 PCDHA1Q9Y5I3 950 aa10.47□□□□□ -0.73
SF3A1-206ENST00000471037 C17orf102A2RUQ5 167 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 PI4K2BG5E9Z4 385 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 AMHP03971 560 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 CCND2P30279 289 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 HOXA13P31271 388 aaPredicted RBP10.46□□□□□ -0.73
SF3A1-206ENST00000471037 THPOP40225 353 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 LEXMQ3ZCV2 418 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 FAM117BQ6P1L5 589 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.46□□□□□ -0.73
SF3A1-206ENST00000471037 FBXO22Q8NEZ5 403 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 SAMD11Q96NU1 681 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 KIF2CQ99661 725 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 C17orf80Q9BSJ5 609 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 RIOX1Q9H6W3 641 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 CD320Q9NPF0 282 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 FOXD4L1Q9NU39 408 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 FRMPD4Q14CM0 1322 aa10.46□□□□□ -0.73
SF3A1-206ENST00000471037 MICAL3Q7RTP6 2002 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 H3BRB1 525 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 GCOM1H8Y6P7 765 aaPredicted RBP10.45□□□□□ -0.74
SF3A1-206ENST00000471037 STAM2O75886 525 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 LGALS2P05162 132 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 HMGB1P09429 215 aaKnown RBP10.45□□□□□ -0.74
SF3A1-206ENST00000471037 POLR2MP0CAP2 368 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 ICAM3P32942 547 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 TRDNQ13061 729 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 SLC35G1Q2M3R5 365 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 FAM178BQ8IXR5 827 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 MYOCDQ8IZQ8 938 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.45□□□□□ -0.74
SF3A1-206ENST00000471037 ATP6V0A1Q93050 837 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 MRPL38Q96DV4 380 aaKnown RBP10.45□□□□□ -0.74
SF3A1-206ENST00000471037 INPP4AQ96PE3 977 aaPredicted RBP10.45□□□□□ -0.74
SF3A1-206ENST00000471037 RNPEPQ9H4A4 650 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 TUT1Q9H6E5 874 aaKnown RBP10.45□□□□□ -0.74
SF3A1-206ENST00000471037 MLXIPQ9HAP2 919 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 RBM19Q9Y4C8 960 aaKnown RBP10.45□□□□□ -0.74
SF3A1-206ENST00000471037 BRWD1Q9NSI6 2320 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 MYH7BA7E2Y1 1941 aa10.45□□□□□ -0.74
SF3A1-206ENST00000471037 E7EWF7 191 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 H3BNC9 293 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 TREHO43280 583 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 SORBS3O60504 671 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 SMIM10L2AP0DMW4 78 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 SMIM10L2BP0DMW5 78 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 KCNA5P22460 613 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 ANP32AP39687 249 aaKnown RBP10.44□□□□□ -0.74
SF3A1-206ENST00000471037 NEDD9Q14511 834 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 GRM4Q14833 912 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 COL19A1Q14993 1142 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 PTPROQ16827 1216 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 PUS10Q3MIT2 529 aaKnown RBP10.44□□□□□ -0.74
SF3A1-206ENST00000471037 ADCK5Q3MIX3 580 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 GNPTABQ3T906 1256 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 EPC2Q52LR7 807 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 TIGD5Q53EQ6 642 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 BLOC1S2Q6QNY1 142 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 METTL7BQ6UX53 244 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 CYB5R4Q7L1T6 521 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 RALYLQ86SE5 291 aaKnown RBP10.44□□□□□ -0.74
SF3A1-206ENST00000471037 HOMER1Q86YM7 354 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 GJD3Q8N144 294 aa10.44□□□□□ -0.74
SF3A1-206ENST00000471037 NCOA7Q8NI08 942 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms