RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 PHOSPHO2Q8TCD6 241 aa13.5□□□□□ -0.25
HDLBP-232ENST00000470482 GPRASP2Q96D09 838 aa13.5□□□□□ -0.25
HDLBP-232ENST00000470482 KATNAL1Q9BW62 490 aa13.5□□□□□ -0.25
HDLBP-232ENST00000470482 RNPEPQ9H4A4 650 aa13.5□□□□□ -0.25
HDLBP-232ENST00000470482 TUT1Q9H6E5 874 aaKnown RBP13.5□□□□□ -0.25
HDLBP-232ENST00000470482 RBM28Q9NW13 759 aaKnown RBP13.5□□□□□ -0.25
HDLBP-232ENST00000470482 PCDHA11Q9Y5I1 949 aa13.5□□□□□ -0.25
HDLBP-232ENST00000470482 SLC4A7Q9Y6M7 1214 aa13.5□□□□□ -0.25
HDLBP-232ENST00000470482 GBF1Q92538 1859 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 GSTTP1A0A1W2PQM5 241 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 STXBP3O00186 592 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 EDIL3O43854 480 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
HDLBP-232ENST00000470482 MYOGP15173 224 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 POU3F3P20264 500 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-232ENST00000470482 ADD1P35611 737 aaKnown RBP13.49□□□□□ -0.25
HDLBP-232ENST00000470482 RABGGTBP53611 331 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 RAB30Q15771 203 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 NTRK3Q16288 839 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 PKN1Q16512 942 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 UBE2SQ16763 222 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 GNPTABQ3T906 1256 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 CYFIP1Q7L576 1253 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 DEFB128Q7Z7B8 93 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 C7orf31Q8N865 590 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 RETREG2Q8NC44 543 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 SMARCC2Q8TAQ2 1214 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 ALG1Q9BT22 464 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 USP26Q9BXU7 913 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 OSBPL7Q9BZF2 842 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 MLXIPQ9HAP2 919 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 RIC8AQ9NPQ8 531 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 SEC63Q9UGP8 760 aaKnown RBP13.49□□□□□ -0.25
HDLBP-232ENST00000470482 PCDHA6Q9UN73 950 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 PCDHA8Q9Y5H6 950 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 V9GY48 417 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-232ENST00000470482 PTPRSQ13332 1948 aa13.49□□□□□ -0.25
HDLBP-232ENST00000470482 MAFGO15525 162 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 ZBTB43O43298 467 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 SORBS3O60504 671 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 PARNO95453 639 aaKnown RBP13.48□□□□□ -0.25
HDLBP-232ENST00000470482 SMIM10L2AP0DMW4 78 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 SMIM10L2BP0DMW5 78 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 ATP2A2P16615 1042 aaKnown RBP13.48□□□□□ -0.25
HDLBP-232ENST00000470482 RTN1Q16799 776 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 ZNF618Q5T7W0 954 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 LRRC8DQ7L1W4 858 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 RPAINQ86UA6 219 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 USP38Q8NB14 1042 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 MAFAQ8NHW3 353 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-232ENST00000470482 CYP2W1Q8TAV3 490 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 CCDC136Q96JN2 1154 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 PCYT2Q99447 389 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 MTIF3Q9H2K0 278 aaKnown RBP13.48□□□□□ -0.25
HDLBP-232ENST00000470482 NKX2-4Q9H2Z4 354 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 JADE2Q9NQC1 790 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 BARHL2Q9NY43 387 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 DOCK5Q9H7D0 1870 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 NCOR1O75376 2440 aa13.48□□□□□ -0.25
HDLBP-232ENST00000470482 MEIS1O00470 390 aa13.47□□□□□ -0.25
HDLBP-232ENST00000470482 TREHO43280 583 aa13.47□□□□□ -0.25
HDLBP-232ENST00000470482 BAIAP3O94812 1187 aa13.47□□□□□ -0.25
HDLBP-232ENST00000470482 FAM26DQ5JW98 314 aa13.47□□□□□ -0.25
HDLBP-232ENST00000470482 PPP1R18Q6NYC8 613 aa13.47□□□□□ -0.25
HDLBP-232ENST00000470482 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.47□□□□□ -0.25
HDLBP-232ENST00000470482 CUL5Q93034 780 aa13.47□□□□□ -0.25
HDLBP-232ENST00000470482 MSRAQ9UJ68 235 aa13.47□□□□□ -0.25
HDLBP-232ENST00000470482 KLF18A0A0U1RQI7 1052 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 hCG_1984214I3L0E3 225 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 LGR5O75473 907 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 ATG7O95352 703 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 FOSL2P15408 326 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 RPS6KB1P23443 525 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 WDR5P61964 334 aaKnown RBP13.46□□□□□ -0.25
HDLBP-232ENST00000470482 PFKFB3Q16875 520 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-232ENST00000470482 MARCH8Q5T0T0 291 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 NLRX1Q86UT6 975 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 TRIM50Q86XT4 487 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 HERC6Q8IVU3 1022 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 CCDC155Q8N6L0 562 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 ZNF713Q8N859 430 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-232ENST00000470482 SLC9A7Q96T83 725 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 MXRA8Q9BRK3 442 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 PRDM12Q9H4Q4 367 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 MUC3AQ02505 3323 aa13.46□□□□□ -0.25
HDLBP-232ENST00000470482 PRRC2BQ5JSZ5 2229 aaKnown RBP13.45□□□□□ -0.26
HDLBP-232ENST00000470482 BDP1A6H8Y1 2624 aa13.45□□□□□ -0.26
HDLBP-232ENST00000470482 ABHD14A-ACY1A0A1B0GW23 586 aa13.45□□□□□ -0.26
HDLBP-232ENST00000470482 ESYT2A0FGR8 921 aa13.45□□□□□ -0.26
HDLBP-232ENST00000470482 MBLAC1A4D2B0 266 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-232ENST00000470482 EPOPA6NHQ4 379 aa13.45□□□□□ -0.26
HDLBP-232ENST00000470482 DHX15O43143 795 aaKnown RBP13.45□□□□□ -0.26
HDLBP-232ENST00000470482 PRPF3O43395 683 aaKnown RBP13.45□□□□□ -0.26
HDLBP-232ENST00000470482 CAND2O75155 1236 aa13.45□□□□□ -0.26
HDLBP-232ENST00000470482 FOSP01100 380 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-232ENST00000470482 CYP3A4P08684 503 aa13.45□□□□□ -0.26
HDLBP-232ENST00000470482 SREBF1P36956 1147 aa13.45□□□□□ -0.26
HDLBP-232ENST00000470482 TAP1Q03518 808 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms