RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 IPO5O00410 1097 aaKnown RBP9.16□□□□□ -0.94
HDAC6-216ENST00000468949 NOP56O00567 594 aaKnown RBP9.16□□□□□ -0.94
HDAC6-216ENST00000468949 GJB1P08034 283 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 ITGB5P18084 799 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 CYP3A7P24462 503 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 MARCKSP29966 332 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-216ENST00000468949 CNGA1P29973 690 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 CYP2C19P33261 490 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 PRPHP41219 470 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 TXKP42681 527 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 MRPS9P82933 396 aaKnown RBP9.16□□□□□ -0.94
HDAC6-216ENST00000468949 ACVR2BQ13705 512 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 NEDD9Q14511 834 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 SLC39A14Q15043 492 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 MTFR1Q15390 333 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 CCL14Q16627 93 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 ARL6IP4Q66PJ3 421 aaKnown RBP9.16□□□□□ -0.94
HDAC6-216ENST00000468949 LINC00301Q8NCQ3 95 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 ERMNQ8TAM6 284 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 MORC4Q8TE76 937 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 LEO1Q8WVC0 666 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-216ENST00000468949 CRYGNQ8WXF5 182 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 TRIB2Q92519 343 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 USP6NLQ92738 828 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 FGD4Q96M96 766 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 MFRPQ9BY79 579 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 RNF208Q9H0X6 261 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 MLXIPQ9HAP2 919 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 KCNH7Q9NS40 1196 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 TBC1D22BQ9NU19 505 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 NRBP1Q9UHY1 535 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 GJD2Q9UKL4 321 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 SAMM50Q9Y512 469 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 DDX49Q9Y6V7 483 aaKnown RBP9.16□□□□□ -0.94
HDAC6-216ENST00000468949 IGLV3-22A0A075B6J6 115 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 DDX11L8A8MPP1 907 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 MEIS1O00470 390 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 WNT7AO00755 349 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 NKRFO15226 690 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDAC6-216ENST00000468949 MSH4O15457 936 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 CHMP2AO43633 222 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 PPP6R2O75170 966 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 TXNP10599 105 aaKnown RBP9.15□□□□□ -0.94
HDAC6-216ENST00000468949 TGFB3P10600 412 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 AKR1A1P14550 325 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 CAPN2P17655 700 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 EN2P19622 333 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-216ENST00000468949 PTMSP20962 102 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 GJA8P48165 433 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 KRT76Q01546 638 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 SP4Q02446 784 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 BRDTQ58F21 947 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-216ENST00000468949 HAUS3Q68CZ6 603 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 NCAPH2Q6IBW4 605 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 CYP2W1Q8TAV3 490 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 CDK5RAP3Q96JB5 506 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 MBOAT7Q96N66 472 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 UIMC1Q96RL1 719 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 RIT2Q99578 217 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDAC6-216ENST00000468949 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 TTC12Q9H892 705 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-216ENST00000468949 SPC25Q9HBM1 224 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 AGO4Q9HCK5 861 aaKnown RBP9.15□□□□□ -0.94
HDAC6-216ENST00000468949 JPH1Q9HDC5 661 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-216ENST00000468949 FAM13BQ9NYF5 915 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 FLRT1Q9NZU1 646 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 FAM184BQ9ULE4 1060 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 PCDHA12Q9UN75 941 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 SMCHD1A6NHR9 2005 aa9.15□□□□□ -0.94
HDAC6-216ENST00000468949 MYH15Q9Y2K3 1946 aa9.15□□□□□ -0.95
HDAC6-216ENST00000468949 PLXNA1Q9UIW2 1896 aa9.15□□□□□ -0.95
HDAC6-216ENST00000468949 ELP1O95163 1332 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 MYH7BA7E2Y1 1941 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 SPATA31C2B4DYI2 1134 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 SORBS3O60504 671 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 CUTAO60888 179 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 GGPS1O95749 300 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 SNAI1O95863 264 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-216ENST00000468949 GH1P01241 217 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 ARP10275 920 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 UBA1P22314 1058 aaKnown RBP9.14□□□□□ -0.95
HDAC6-216ENST00000468949 ICAM3P32942 547 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 LONP1P36776 959 aaKnown RBP9.14□□□□□ -0.95
HDAC6-216ENST00000468949 ADCYAP1R1P41586 468 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 TECP42680 631 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 JAK3P52333 1124 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 TNFAIP2Q03169 654 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 KRT79Q5XKE5 535 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 CCDC73Q6ZRK6 1079 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 MIER3Q7Z3K6 550 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 DHX37Q8IY37 1157 aaKnown RBP9.14□□□□□ -0.95
HDAC6-216ENST00000468949 OR6J1Q8NGC5 347 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 ETNPPLQ8TBG4 499 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 U2AF1L4Q8WU68 220 aaKnown RBP9.14□□□□□ -0.95
HDAC6-216ENST00000468949 LENG9Q96B70 501 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 AK8Q96MA6 479 aa9.14□□□□□ -0.95
HDAC6-216ENST00000468949 CCDC43Q96MW1 224 aaKnown RBP9.14□□□□□ -0.95
HDAC6-216ENST00000468949 SENP7Q9BQF6 1050 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms