RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 EHHADHQ08426 723 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 ASPRV1Q53RT3 343 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 DBNDD1Q9H9R9 158 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 SMARCAL1Q9NZC9 954 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 G3V3G9 751 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 KCNMA1Q12791 1236 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 ECM1Q16610 540 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 UBE2SQ16763 222 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 DCAF8Q5TAQ9 597 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 SND1Q7KZF4 910 aaKnown RBP eCLIP17.45■□□□□ 0.385e-7■■■□□ 16.2
TSPAN4-211ENST00000468468 MYOCDQ8IZQ8 938 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 EHD2Q9NZN4 543 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 GOLGA6BA6NDN3 693 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 PJA2O43164 708 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 HMGB2P26583 209 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 SLC7A5Q01650 507 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 ASTE1Q2TB18 679 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 TDRD12Q587J7 1177 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 EDEM3Q9BZQ6 932 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 NLRC4Q9NPP4 1024 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 TRAF5O00463 557 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 MARCH6O60337 910 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 PAFAH1B1P43034 410 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 GTF2A1P52655 376 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 COASYQ13057 564 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 CCDC40Q4G0X9 1142 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 CLEC10AQ8IUN9 316 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 FLAD1Q8NFF5 587 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 GJA10Q969M2 543 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 COL4A3BPQ9Y5P4 624 aa17.44■□□□□ 0.38
TSPAN4-211ENST00000468468 BUB1O43683 1085 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 HOXA7P31268 230 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 SLC1A4P43007 532 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 NAP1L1P55209 391 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 FKBP3Q00688 224 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 HGSNATQ68CP4 663 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 DDX25Q9UHL0 483 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 SSU72P8A0A1W2PR75 194 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 SSBP05455 408 aaKnown RBP eCLIP17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 SLURP2P0DP57 97 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 AKR1B1P15121 316 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 PPP4R3AQ6IN85 833 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 DNAJC19Q96DA6 116 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 MTMR8Q96EF0 704 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 NOX5Q96PH1 765 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 PANK4Q9NVE7 773 aa17.43■□□□□ 0.38
TSPAN4-211ENST00000468468 RUBCNQ92622 972 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 TLR10Q9BXR5 811 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 TMX4Q9H1E5 349 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 JMJD4Q9H9V9 463 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 TBC1D7Q9P0N9 293 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 PNMA6FA0A0J9YX94 578 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 SNHG28P0DPA3 235 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 ZCWPW2Q504Y3 356 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 FAM26FQ5R3K3 315 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 KLHDC7AQ5VTJ3 777 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 ADGRF4Q8IZF3 695 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 FAM76AQ8TAV0 307 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 HAS1Q92839 578 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 PLEKHA4Q9H4M7 779 aa17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 GEMIN8Q9NWZ8 242 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-211ENST00000468468 MYH10P35580 1976 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 RXRBP28702 533 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 SLC9C1Q4G0N8 1177 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 SFMBT2Q5VUG0 894 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 HAUS3Q68CZ6 603 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 FOXR2Q6PJQ5 311 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 YY1AP1Q9H869 796 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 BMP2KQ9NSY1 1161 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 CEP72Q9P209 647 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 SUGT1Q9Y2Z0 365 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 PCDHAC2Q9Y5I4 1007 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 ADAMTSL1Q8N6G6 1762 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 GOLGA6CA6NDK9 693 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 PPP1R11O60927 126 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 GOLGA6DP0CG33 693 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 CHRNA5P30532 468 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 FAM83BQ5T0W9 1011 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 RNF10Q8N5U6 811 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 LSM14BQ9BX40 385 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 GOLGA6AQ9NYA3 693 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 PCDHA12Q9UN75 941 aa17.41■□□□□ 0.38
TSPAN4-211ENST00000468468 NOL4O94818 638 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 GABPAQ06546 454 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 ZNF543Q08ER8 600 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 SEPT2Q15019 361 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 TTBK2Q6IQ55 1244 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 CDC42EP5Q6NZY7 148 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 NELFCDQ8IXH7 590 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 STIM2Q9P246 746 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 TLR2O60603 784 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 PPFIA4O75335 1185 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 SERPING1P05155 500 aa17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 CLK2P49760 499 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 POLR2FP61218 127 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-211ENST00000468468 NFIAQ12857 509 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms