RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 BCAS3Q9H6U6 928 aa15.19■□□□□ 0.02
PTPN7-207ENST00000468385 CNNM2Q9H8M5 875 aa15.19■□□□□ 0.02
PTPN7-207ENST00000468385 H3BRB1 525 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 HIP1O00291 1037 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 TREHO43280 583 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 LGALS2P05162 132 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 SMIM10L2AP0DMW4 78 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 SMIM10L2BP0DMW5 78 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 CCND2P30279 289 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 NUCB1Q02818 461 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 EPC2Q52LR7 807 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 CYB5R4Q7L1T6 521 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 GJD3Q8N144 294 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 TOP1MTQ969P6 601 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 IL25Q9H293 177 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 TUT1Q9H6E5 874 aaKnown RBP15.18■□□□□ 0.02
PTPN7-207ENST00000468385 MLXIPQ9HAP2 919 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 CTNNA3Q9UI47 895 aa15.18■□□□□ 0.02
PTPN7-207ENST00000468385 GCOM1H8Y6P7 765 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-207ENST00000468385 IGHDP01880 384 aa15.17■□□□□ 0.02
PTPN7-207ENST00000468385 POLR2MP0CAP2 368 aa15.17■□□□□ 0.02
PTPN7-207ENST00000468385 PTCRAQ6ISU1 281 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-207ENST00000468385 FCHSD1Q86WN1 690 aa15.17■□□□□ 0.02
PTPN7-207ENST00000468385 HOMER1Q86YM7 354 aa15.17■□□□□ 0.02
PTPN7-207ENST00000468385 NEK9Q8TD19 979 aa15.17■□□□□ 0.02
PTPN7-207ENST00000468385 MRPL38Q96DV4 380 aaKnown RBP15.17■□□□□ 0.02
PTPN7-207ENST00000468385 SAMD11Q96NU1 681 aa15.17■□□□□ 0.02
PTPN7-207ENST00000468385 PIGSQ96S52 555 aa15.17■□□□□ 0.02
PTPN7-207ENST00000468385 RIOX1Q9H6W3 641 aa15.17■□□□□ 0.02
PTPN7-207ENST00000468385 COL4A6Q14031 1691 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-207ENST00000468385 GRXCR2A6NFK2 248 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 H3BNC9 293 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 CYTH3O43739 400 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 CAND2O75155 1236 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 CTSHP09668 335 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 ICAM3P32942 547 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 MRPS9P82933 396 aaKnown RBP15.16■□□□□ 0.02
PTPN7-207ENST00000468385 GRM4Q14833 912 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 PTPROQ16827 1216 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 SEPT8Q92599 483 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 YME1L1Q96TA2 773 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-207ENST00000468385 FRMPD4Q14CM0 1322 aa15.16■□□□□ 0.02
PTPN7-207ENST00000468385 UPP2O95045 317 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 SEMA3FQ13275 785 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 GPM6BQ13491 265 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 AAMPQ13685 434 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 TIGD5Q53EQ6 642 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 METTL7BQ6UX53 244 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 TMEM192Q8IY95 271 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 BANK1Q8NDB2 785 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 INPP4AQ96PE3 977 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-207ENST00000468385 GPR20Q99678 358 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 USP26Q9BXU7 913 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 SENP2Q9HC62 589 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 SETD4Q9NVD3 440 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 TELO2Q9Y4R8 837 aa15.15■□□□□ 0.02
PTPN7-207ENST00000468385 PRR33A8MZF0 331 aa15.14■□□□□ 0.01
PTPN7-207ENST00000468385 SPATA31C2B4DYI2 1134 aa15.14■□□□□ 0.01
PTPN7-207ENST00000468385 H3BQ06 376 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-207ENST00000468385 NOP56O00567 594 aaKnown RBP15.14■□□□□ 0.01
PTPN7-207ENST00000468385 ADAM17P78536 824 aa15.14■□□□□ 0.01
PTPN7-207ENST00000468385 TRAF1Q13077 416 aa15.14■□□□□ 0.01
PTPN7-207ENST00000468385 NEDD9Q14511 834 aa15.14■□□□□ 0.01
PTPN7-207ENST00000468385 COL19A1Q14993 1142 aa15.14■□□□□ 0.01
PTPN7-207ENST00000468385 PUS10Q3MIT2 529 aaKnown RBP15.14■□□□□ 0.01
PTPN7-207ENST00000468385 GNPTABQ3T906 1256 aa15.14■□□□□ 0.01
PTPN7-207ENST00000468385 TCEAL5Q5H9L2 206 aa15.14■□□□□ 0.01
PTPN7-207ENST00000468385 CYFIP1Q7L576 1253 aa15.14■□□□□ 0.01
PTPN7-207ENST00000468385 PNMA6FA0A0J9YX94 578 aa15.13■□□□□ 0.01
PTPN7-207ENST00000468385 STAM2O75886 525 aa15.13■□□□□ 0.01
PTPN7-207ENST00000468385 SSTR3P32745 418 aaPredicted RBP15.13■□□□□ 0.01
PTPN7-207ENST00000468385 TROAPQ12815 778 aa15.13■□□□□ 0.01
PTPN7-207ENST00000468385 FAM26DQ5JW98 314 aa15.13■□□□□ 0.01
PTPN7-207ENST00000468385 TRIM50Q86XT4 487 aa15.13■□□□□ 0.01
PTPN7-207ENST00000468385 APBB2Q92870 758 aa15.13■□□□□ 0.01
PTPN7-207ENST00000468385 PABPC5Q96DU9 382 aaKnown RBP15.13■□□□□ 0.01
PTPN7-207ENST00000468385 RTEL1Q9NZ71 1219 aa15.13■□□□□ 0.01
PTPN7-207ENST00000468385 IFIT3O14879 490 aaKnown RBP15.12■□□□□ 0.01
PTPN7-207ENST00000468385 FIBPO43427 364 aa15.12■□□□□ 0.01
PTPN7-207ENST00000468385 GNAT1P11488 350 aa15.12■□□□□ 0.01
PTPN7-207ENST00000468385 LMBR1Q8WVP7 490 aa15.12■□□□□ 0.01
PTPN7-207ENST00000468385 IFIH1Q9BYX4 1025 aaKnown RBP15.12■□□□□ 0.01
PTPN7-207ENST00000468385 NSUN3Q9H649 340 aaKnown RBP15.12■□□□□ 0.01
PTPN7-207ENST00000468385 CYP21A2P08686 494 aa15.11■□□□□ 0.01
PTPN7-207ENST00000468385 LINC00271P0C7V0 271 aa15.11■□□□□ 0.01
PTPN7-207ENST00000468385 ALADP13716 330 aa15.11■□□□□ 0.01
PTPN7-207ENST00000468385 ARHGAP4P98171 946 aa15.11■□□□□ 0.01
PTPN7-207ENST00000468385 TRDNQ13061 729 aa15.11■□□□□ 0.01
PTPN7-207ENST00000468385 UTP14CQ5TAP6 766 aaKnown RBP15.11■□□□□ 0.01
PTPN7-207ENST00000468385 ZNF215Q9UL58 517 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-207ENST00000468385 SUPT16HQ9Y5B9 1047 aaKnown RBP15.11■□□□□ 0.01
PTPN7-207ENST00000468385 NLRC5Q86WI3 1866 aa15.11■□□□□ 0.01
PTPN7-207ENST00000468385 BAZ2BQ9UIF8 2168 aaKnown RBP15.11■□□□□ 0.01
PTPN7-207ENST00000468385 RALGAPA2Q2PPJ7 1873 aa15.1■□□□□ 0.01
PTPN7-207ENST00000468385 DOCK5Q9H7D0 1870 aa15.1■□□□□ 0.01
PTPN7-207ENST00000468385 POTEB3A0JP26 581 aa15.1■□□□□ 0.01
PTPN7-207ENST00000468385 C5orf67F2Z3F1 127 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms