RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 RAVER2Q9HCJ3 691 aaKnown RBP11.35□□□□□ -0.59
MSH5-213ENST00000468136 RNF146Q9NTX7 359 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 SEL1LQ9UBV2 794 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 ADD3Q9UEY8 706 aaKnown RBP11.35□□□□□ -0.59
MSH5-213ENST00000468136 SNCAIPQ9Y6H5 919 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 SSC5DA1L4H1 1573 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 LOC102724159A0A0B4J2E5 919 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 A0A1W2PQC6 194 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 SPDYE5A6NIY4 337 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 KIF2AO00139 706 aaPredicted RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 IPO5O00410 1097 aaKnown RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 OFD1O75665 1012 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 LYPLA2O95372 231 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 YBX3P16989 372 aaKnown RBP eCLIP11.34□□□□□ -0.59
MSH5-213ENST00000468136 CASP1P29466 404 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 CCND2P30279 289 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 SFNP31947 248 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 JAK3P52333 1124 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 TERF1P54274 439 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 SLC12A3P55017 1021 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 RPS6P62753 249 aaKnown RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 KRT76Q01546 638 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 PPIL2Q13356 520 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 VGLL4Q14135 290 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 NOLC1Q14978 699 aaKnown RBP eCLIP11.34□□□□□ -0.59
MSH5-213ENST00000468136 PWP2Q15269 919 aaKnown RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 TCP11X2Q5H9J9 407 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 FAM26FQ5R3K3 315 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 TTI2Q6NXR4 508 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 B3GNT9Q6UX72 402 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 STXBP4Q6ZWJ1 553 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.34□□□□□ -0.59
MSH5-213ENST00000468136 FASTKD5Q7L8L6 764 aaKnown RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 CCDC84Q86UT8 332 aaPredicted RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 TRMT44Q8IYL2 757 aaKnown RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 MYOCDQ8IZQ8 938 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 RETREG2Q8NC44 543 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 SLC17A8Q8NDX2 589 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 DNERQ8NFT8 737 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 NSUN6Q8TEA1 469 aaKnown RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 DNAJC19Q96DA6 116 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 ATG4CQ96DT6 458 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 MED15Q96RN5 788 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 MPHOSPH6Q99547 160 aaKnown RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 NUP58Q9BVL2 599 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 SAMSN1Q9NSI8 373 aaKnown RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 PANK4Q9NVE7 773 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 ZNF214Q9UL59 606 aaPredicted RBP11.34□□□□□ -0.59
MSH5-213ENST00000468136 GDAQ9Y2T3 454 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 COL4A3BPQ9Y5P4 624 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 PFASO15067 1338 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 UBE4BO95155 1302 aa11.34□□□□□ -0.59
MSH5-213ENST00000468136 A0A0G2JLL6 359 aaPredicted RBP11.33□□□□□ -0.6
MSH5-213ENST00000468136 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 POTECB2RU33 542 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 KCNJ18B7U540 433 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 NFIBO00712 420 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 IRF6O14896 467 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 MED24O75448 989 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 SLC25A27O95847 323 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 KRT18P05783 430 aaKnown RBP11.33□□□□□ -0.6
MSH5-213ENST00000468136 P4HBP07237 508 aaKnown RBP11.33□□□□□ -0.6
MSH5-213ENST00000468136 SPATA31C1P0DKV0 1188 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 IDEP14735 1019 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 CYP11B2P19099 503 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 STAT3P40763 770 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 DNM2P50570 870 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 STX17P56962 302 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 FKBP1BP68106 108 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 STK4Q13043 487 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 TBX2Q13207 712 aaPredicted RBP11.33□□□□□ -0.6
MSH5-213ENST00000468136 KCNJ12Q14500 433 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 GNPTABQ3T906 1256 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 ARHGEF16Q5VV41 709 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 PRRT2Q7Z6L0 340 aaPredicted RBP11.33□□□□□ -0.6
MSH5-213ENST00000468136 PPFIBP1Q86W92 1011 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 GPBP1Q86WP2 473 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 CNGA4Q8IV77 575 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 LRRC15Q8TF66 581 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 CACTINQ8WUQ7 758 aaKnown RBP11.33□□□□□ -0.6
MSH5-213ENST00000468136 CEP63Q96MT8 703 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 RMDN3Q96TC7 470 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 SENP7Q9BQF6 1050 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 NUDT12Q9BQG2 462 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 PDCD2LQ9BRP1 358 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 KCNF1Q9H3M0 494 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 KCNG1Q9UIX4 513 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 ODF2LQ9ULJ1 636 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 KCNH4Q9UQ05 1017 aa11.33□□□□□ -0.6
MSH5-213ENST00000468136 SCN4AP35499 1836 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 GOLGA6L9A6NEM1 432 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 SPDYE16A6NNV3 312 aaPredicted RBP11.32□□□□□ -0.6
MSH5-213ENST00000468136 N4BP3O15049 544 aa11.32□□□□□ -0.6
MSH5-213ENST00000468136 STX10O60499 249 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms