RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 EPC2Q52LR7 807 aa10.4□□□□□ -0.75
PTPDC1-203ENST00000467049 CNNM2Q9H8M5 875 aa10.4□□□□□ -0.75
PTPDC1-203ENST00000467049 FAM50BQ9Y247 325 aa10.4□□□□□ -0.75
PTPDC1-203ENST00000467049 FRMPD4Q14CM0 1322 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 ZBTB5O15062 677 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 PPP1R11O60927 126 aaPredicted RBP10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 SMIM10L2AP0DMW4 78 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 SMIM10L2BP0DMW5 78 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 SSTR3P32745 418 aaPredicted RBP10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 GPM6BQ13491 265 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 IMMTQ16891 758 aaKnown RBP10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 BANK1Q8NDB2 785 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 IL31RAQ8NI17 732 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 APBB2Q92870 758 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 ATP6V0A1Q93050 837 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 TOP1MTQ969P6 601 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 PABPC5Q96DU9 382 aaKnown RBP10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 UBAC1Q9BSL1 405 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 LNPKQ9C0E8 428 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 OSBPL3Q9H4L5 887 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 MLXIPQ9HAP2 919 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 DIAPH3Q9NSV4 1193 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 PRKAG3Q9UGI9 489 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 PCDHA1Q9Y5I3 950 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 KIAA1671Q9BY89 1806 aa10.39□□□□□ -0.75
PTPDC1-203ENST00000467049 PALM3A6NDB9 673 aaPredicted RBP10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 KLRF2D3W0D1 207 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 H3BRB1 525 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 LGALS2P05162 132 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 GNAT1P11488 350 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 ICAM3P32942 547 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 SP2Q02086 613 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 AAMPQ13685 434 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 SEC23AQ15436 765 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 FAM26DQ5JW98 314 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 IFIT1BQ5T764 474 aaKnown RBP10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 TMEM192Q8IY95 271 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 YME1L1Q96TA2 773 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 KCNH6Q9H252 994 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 NSUN3Q9H649 340 aaKnown RBP10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 TUT1Q9H6E5 874 aaKnown RBP10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 TTC3P53804 2025 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 GCOM1H8Y6P7 765 aaPredicted RBP10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 TREHO43280 583 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 DCXO43602 365 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 NCK2O43639 380 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 STAM2O75886 525 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 POLR2MP0CAP2 368 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 HOXA13P31271 388 aaPredicted RBP10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 GRM4Q14833 912 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 TCEAL5Q5H9L2 206 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 SMC5Q8IY18 1101 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 LMAN2LQ9H0V9 348 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 MAD2L2Q9UI95 211 aa10.38□□□□□ -0.75
PTPDC1-203ENST00000467049 POTEB3A0JP26 581 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 C19orf67A6NJJ6 358 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 SORBS3O60504 671 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 RB1P06400 928 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 NEDD9Q14511 834 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 GNPTABQ3T906 1256 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 POTEBQ6S5H4 581 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 CWC27Q6UX04 472 aaKnown RBP10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 PLEKHM2Q8IWE5 1019 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 GPKOWQ92917 476 aaPredicted RBP eCLIP10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 USP26Q9BXU7 913 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 RNPEPQ9H4A4 650 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 RIOX1Q9H6W3 641 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 RWDD3Q9Y3V2 267 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 MUC6Q6W4X9 2439 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 LOXHD1Q8IVV2 1947 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 MYO7AQ13402 2215 aa10.37□□□□□ -0.75
PTPDC1-203ENST00000467049 C5orf67F2Z3F1 127 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 NOP56O00567 594 aaKnown RBP10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 ADAM17P78536 824 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 ZP2Q05996 745 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 CSPP1Q1MSJ5 1256 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 SLC35G1Q2M3R5 365 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 METTL7BQ6UX53 244 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 RPAINQ86UA6 219 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 INPP4AQ96PE3 977 aaPredicted RBP10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 IFIH1Q9BYX4 1025 aaKnown RBP10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 ZNF215Q9UL58 517 aaPredicted RBP10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 SPATA31C2B4DYI2 1134 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 H3BQ06 376 aaPredicted RBP10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 FIBPO43427 364 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 EIF5BO60841 1220 aaKnown RBP10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 CTSHP09668 335 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 FCHSD1Q86WN1 690 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 ADHFE1Q8IWW8 467 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 FIBCD1Q8N539 461 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 IL17RAQ96F46 866 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 PIGSQ96S52 555 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 GPR20Q99678 358 aa10.36□□□□□ -0.75
PTPDC1-203ENST00000467049 ZNF318Q5VUA4 2279 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 PNMA6FA0A0J9YX94 578 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 UPP2O95045 317 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 CTNNB1P35222 781 aa10.35□□□□□ -0.75
PTPDC1-203ENST00000467049 MRPS9P82933 396 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms