RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 ARFGEF1Q9Y6D6 1849 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 TULP2O00295 520 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 TLR2O60603 784 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 PRPF6O94906 941 aaKnown RBP21.4■■□□□ 1.02
LIMS2-212ENST00000466410 HOXA7P31268 230 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-212ENST00000466410 APBA1Q02410 837 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 MAPK8IP2Q13387 824 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-212ENST00000466410 ZNF572Q7Z3I7 529 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-212ENST00000466410 CRACR2AQ9BSW2 395 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 COA1Q9GZY4 146 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 BMP2KQ9NSY1 1161 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-212ENST00000466410 HYOU1Q9Y4L1 999 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 PCDHA2Q9Y5H9 948 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 MYH4Q9Y623 1939 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 BRWD3Q6RI45 1802 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 LTBP1Q14766 1721 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 SSU72P8A0A1W2PR75 194 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 POTEB3A0JP26 581 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 POTECB2RU33 542 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 BUB1O43683 1085 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 MATR3P43243 847 aaKnown RBP eCLIP21.4■■□□□ 1.02
LIMS2-212ENST00000466410 POTEBQ6S5H4 581 aa21.4■■□□□ 1.02
LIMS2-212ENST00000466410 PPEF1O14829 653 aaPredicted RBP21.39■■□□□ 1.01
LIMS2-212ENST00000466410 PLA2G4BP0C869 781 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 TCP1P17987 556 aaKnown RBP21.39■■□□□ 1.01
LIMS2-212ENST00000466410 FAM83BQ5T0W9 1011 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 CDC42EP5Q6NZY7 148 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 LEKR1Q6ZMV7 388 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 TMC4Q7Z404 712 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 NT5C3AQ9H0P0 336 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 CEP72Q9P209 647 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 RAD21O60216 631 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 GGCXP38435 758 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 ITIH3Q06033 890 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 CCDC70Q6NSX1 233 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 GPBP1Q86WP2 473 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 LSM14BQ9BX40 385 aaKnown RBP21.39■■□□□ 1.01
LIMS2-212ENST00000466410 TLR10Q9BXR5 811 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 SUGT1Q9Y2Z0 365 aa21.39■■□□□ 1.01
LIMS2-212ENST00000466410 MYO3BQ8WXR4 1341 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 KDM3AQ9Y4C1 1321 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 POLR2FP61218 127 aaKnown RBP21.38■■□□□ 1.01
LIMS2-212ENST00000466410 SLC7A5Q01650 507 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 NFIAQ12857 509 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 HERC4Q5GLZ8 1057 aaPredicted RBP21.38■■□□□ 1.01
LIMS2-212ENST00000466410 CCDC65Q8IXS2 484 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 SP8Q8IXZ3 490 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 AENQ8WTP8 325 aaKnown RBP21.38■■□□□ 1.01
LIMS2-212ENST00000466410 ADAMTSL1Q8N6G6 1762 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 AGPSO00116 658 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 STAT3P40763 770 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 IRX5P78411 483 aaPredicted RBP21.38■■□□□ 1.01
LIMS2-212ENST00000466410 DOK7Q18PE1 504 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 SHROOM1Q2M3G4 852 aaPredicted RBP21.38■■□□□ 1.01
LIMS2-212ENST00000466410 KLHDC7AQ5VTJ3 777 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 TRIM59Q8IWR1 403 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 ZFPM1Q8IX07 1006 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 SCFD1Q8WVM8 642 aa21.38■■□□□ 1.01
LIMS2-212ENST00000466410 A0A0U1RQG5 324 aaPredicted RBP21.37■■□□□ 1.01
LIMS2-212ENST00000466410 POLRMTO00411 1230 aaKnown RBP21.37■■□□□ 1.01
LIMS2-212ENST00000466410 QRICH1Q2TAL8 776 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 SLC9C1Q4G0N8 1177 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 SFMBT2Q5VUG0 894 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.37■■□□□ 1.01
LIMS2-212ENST00000466410 CEP63Q96MT8 703 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 NOX5Q96PH1 765 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 FAM184BQ9ULE4 1060 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 RBAK-RBAKDNI3L0D1 243 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 TRIM37O94972 964 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 CYP11B2P19099 503 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 CCDC181Q5TID7 509 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 ZC3H12CQ9C0D7 883 aaKnown RBP21.37■■□□□ 1.01
LIMS2-212ENST00000466410 KCTD10Q9H3F6 313 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 KCNMB3Q9NPA1 279 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 PCDHA1Q9Y5I3 950 aa21.37■■□□□ 1.01
LIMS2-212ENST00000466410 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.37■■□□□ 1.01
LIMS2-212ENST00000466410 KLRG2A4D1S0 409 aaPredicted RBP21.36■■□□□ 1.01
LIMS2-212ENST00000466410 FAM196BA6NMK8 535 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 NAP1L1P55209 391 aaKnown RBP21.36■■□□□ 1.01
LIMS2-212ENST00000466410 APOBEC3HQ6NTF7 200 aaKnown RBP21.36■■□□□ 1.01
LIMS2-212ENST00000466410 CWC15Q9P013 229 aaKnown RBP21.36■■□□□ 1.01
LIMS2-212ENST00000466410 LRRC37AA6NMS7 1700 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 MED24O75448 989 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 SERPING1P05155 500 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 HLA-DOAP06340 250 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 FOXR1Q6PIV2 292 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 ARHGAP27Q6ZUM4 889 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 AFAP1L1Q8TED9 768 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 ANO3Q9BYT9 981 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 DNAJC18Q9H819 358 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 EMILIN3Q9NT22 766 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 ATP6V0A2Q9Y487 856 aa21.36■■□□□ 1.01
LIMS2-212ENST00000466410 C10orf71Q711Q0 1435 aa21.35■■□□□ 1.01
LIMS2-212ENST00000466410 ARSHQ5FYA8 562 aa21.35■■□□□ 1.01
LIMS2-212ENST00000466410 SND1Q7KZF4 910 aaKnown RBP eCLIP21.35■■□□□ 1.01
LIMS2-212ENST00000466410 SYN2Q92777 582 aaPredicted RBP21.35■■□□□ 1.01
LIMS2-212ENST00000466410 ZHX3Q9H4I2 956 aa21.35■■□□□ 1.01
LIMS2-212ENST00000466410 GREB1LQ9C091 1923 aaPredicted RBP21.35■■□□□ 1.01
LIMS2-212ENST00000466410 POTEFA5A3E0 1075 aa21.35■■□□□ 1.01
LIMS2-212ENST00000466410 RPS6KA5O75582 802 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms