RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 RNF146Q9NTX7 359 aa6.81□□□□□ -1.32
CHMP3-206ENST00000466032 FBXO28Q9NVF7 368 aa6.81□□□□□ -1.32
CHMP3-206ENST00000466032 FAM13BQ9NYF5 915 aa6.81□□□□□ -1.32
CHMP3-206ENST00000466032 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.81□□□□□ -1.32
CHMP3-206ENST00000466032 BIN2Q9UBW5 565 aaPredicted RBP6.81□□□□□ -1.32
CHMP3-206ENST00000466032 USP25Q9UHP3 1055 aa6.81□□□□□ -1.32
CHMP3-206ENST00000466032 FZD1Q9UP38 647 aa6.81□□□□□ -1.32
CHMP3-206ENST00000466032 SRPRBQ9Y5M8 271 aaKnown RBP6.81□□□□□ -1.32
CHMP3-206ENST00000466032 IVNS1ABPQ9Y6Y0 642 aa6.81□□□□□ -1.32
CHMP3-206ENST00000466032 PTPRFP10586 1907 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 BTBD19C9JJ37 291 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 CTAGE5O15320 804 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 FIBPO43427 364 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 MARCH6O60337 910 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 NEMFO60524 1076 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 CCNT1O60563 726 aaKnown RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 PRPF40AO75400 957 aaKnown RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 TPM2P07951 284 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 FCER1AP12319 257 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 BMP1P13497 986 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 CMA1P23946 247 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 GJA5P36382 358 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 ZNF76P36508 570 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 ERVK-9P63128 1117 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 ERVK-24P63145 666 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 ARHGAP4P98171 946 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 SEMA3FQ13275 785 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 PLS1Q14651 629 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 KCTD2Q14681 263 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 ARHGEF6Q15052 776 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 PTPAQ15257 358 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 INF2Q27J81 1249 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 GNPTABQ3T906 1256 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 Q4G0T1 1027 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 FOXD4L5Q5VV16 416 aaPredicted RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 JAKMIP3Q5VZ66 844 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 PCNX4Q63HM2 1172 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 DLK2Q6UY11 383 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 CCDC73Q6ZRK6 1079 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 RASGRP2Q7LDG7 609 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 ANKRD35Q8N283 1001 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 MSL3Q8N5Y2 521 aaKnown RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 ZNF784Q8NCA9 323 aaPredicted RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 CLEC4DQ8WXI8 215 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 FOXD4L4Q8WXT5 416 aaPredicted RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 BRI3BPQ8WY22 251 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 BBXQ8WY36 941 aaPredicted RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 AGBL1Q96MI9 1066 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 MBOAT7Q96N66 472 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 CFHR5Q9BXR6 569 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 LMBRD1Q9NUN5 540 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 DDX19AQ9NUU7 478 aaKnown RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 TFIP11Q9UBB9 837 aaKnown RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 TCEAL9Q9UHQ7 104 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 CNPY2Q9Y2B0 182 aa6.8□□□□□ -1.32
CHMP3-206ENST00000466032 DIS3Q9Y2L1 958 aaKnown RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 DDX49Q9Y6V7 483 aaKnown RBP6.8□□□□□ -1.32
CHMP3-206ENST00000466032 FRMPD4Q14CM0 1322 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 FAM237AA0A1B0GTK4 181 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 ASB14A6NK59 587 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 CA12O43570 354 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 TLR2O60603 784 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 MYL1P05976 194 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 OR52Z1P0C646 297 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 TGFB3P10600 412 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 MUTP22033 750 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 CCND2P30279 289 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 TOB1P50616 345 aaPredicted RBP6.79□□□□□ -1.32
CHMP3-206ENST00000466032 RPS6P62753 249 aaKnown RBP6.79□□□□□ -1.32
CHMP3-206ENST00000466032 PDE4CQ08493 712 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 PTGDRQ13258 359 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 TAF1CQ15572 869 aaPredicted RBP6.79□□□□□ -1.32
CHMP3-206ENST00000466032 CALCRLQ16602 461 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 LETM2Q2VYF4 491 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 CEP55Q53EZ4 464 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 ARHGEF16Q5VV41 709 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 USP17L6PQ6QN14 398 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 PAXIP1Q6ZW49 1069 aaPredicted RBP6.79□□□□□ -1.32
CHMP3-206ENST00000466032 NLRX1Q86UT6 975 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 NCAPG2Q86XI2 1143 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 GIMAP8Q8ND71 665 aaPredicted RBP6.79□□□□□ -1.32
CHMP3-206ENST00000466032 SYTL5Q8TDW5 730 aaPredicted RBP6.79□□□□□ -1.32
CHMP3-206ENST00000466032 CRYGNQ8WXF5 182 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 MRPS27Q92552 414 aaKnown RBP6.79□□□□□ -1.32
CHMP3-206ENST00000466032 MRGPRX2Q96LB1 330 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 TIGD1Q96MW7 591 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 RMDN3Q96TC7 470 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 GTPBP4Q9BZE4 634 aaKnown RBP6.79□□□□□ -1.32
CHMP3-206ENST00000466032 LRRC27Q9C0I9 530 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 CUEDC2Q9H467 287 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 MAGEF1Q9HAY2 307 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 GJB4Q9NTQ9 266 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 TBC1D22BQ9NU19 505 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 CYP39A1Q9NYL5 469 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 RBPJLQ9UBG7 517 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 CCDC39Q9UFE4 941 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 DDX25Q9UHL0 483 aaKnown RBP6.79□□□□□ -1.32
CHMP3-206ENST00000466032 CLIC4Q9Y696 253 aa6.79□□□□□ -1.32
CHMP3-206ENST00000466032 A0A0G2JMZ2 1700 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms