RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 PTH1RQ03431 593 aa16.42■□□□□ 0.22
ATG4B-214ENST00000465399 TROAPQ12815 778 aa16.42■□□□□ 0.22
ATG4B-214ENST00000465399 NEDD9Q14511 834 aa16.42■□□□□ 0.22
ATG4B-214ENST00000465399 HIC1Q14526 733 aa16.42■□□□□ 0.22
ATG4B-214ENST00000465399 SLC35G1Q2M3R5 365 aa16.42■□□□□ 0.22
ATG4B-214ENST00000465399 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.22
ATG4B-214ENST00000465399 INSL6Q9Y581 213 aa16.42■□□□□ 0.22
ATG4B-214ENST00000465399 FRMPD4Q14CM0 1322 aa16.42■□□□□ 0.22
ATG4B-214ENST00000465399 RALGAPA2Q2PPJ7 1873 aa16.42■□□□□ 0.22
ATG4B-214ENST00000465399 SMIM10L2AP0DMW4 78 aa16.41■□□□□ 0.22
ATG4B-214ENST00000465399 SMIM10L2BP0DMW5 78 aa16.41■□□□□ 0.22
ATG4B-214ENST00000465399 CHMLP26374 656 aa16.41■□□□□ 0.22
ATG4B-214ENST00000465399 METTL7BQ6UX53 244 aa16.41■□□□□ 0.22
ATG4B-214ENST00000465399 C1QTNF1Q9BXJ1 281 aa16.41■□□□□ 0.22
ATG4B-214ENST00000465399 USP26Q9BXU7 913 aa16.41■□□□□ 0.22
ATG4B-214ENST00000465399 SUGCTQ9HAC7 445 aa16.41■□□□□ 0.22
ATG4B-214ENST00000465399 SENP2Q9HC62 589 aa16.41■□□□□ 0.22
ATG4B-214ENST00000465399 FIBPO43427 364 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 CAND2O75155 1236 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 GNAT1P11488 350 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 HOXC8P31273 242 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 ICAM3P32942 547 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 MRPS9P82933 396 aaKnown RBP16.4■□□□□ 0.22
ATG4B-214ENST00000465399 PLEKHG4Q58EX7 1191 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.4■□□□□ 0.22
ATG4B-214ENST00000465399 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 MYOCDQ8IZQ8 938 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 DBF4BQ8NFT6 615 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-214ENST00000465399 PIBF1Q8WXW3 757 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 CUL5Q93034 780 aa16.4■□□□□ 0.22
ATG4B-214ENST00000465399 INPP4AQ96PE3 977 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-214ENST00000465399 ZNF215Q9UL58 517 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-214ENST00000465399 SPATA31C2B4DYI2 1134 aa16.39■□□□□ 0.21
ATG4B-214ENST00000465399 TREHO43280 583 aa16.39■□□□□ 0.21
ATG4B-214ENST00000465399 KIF5BP33176 963 aa16.39■□□□□ 0.21
ATG4B-214ENST00000465399 SMARCC2Q8TAQ2 1214 aa16.39■□□□□ 0.21
ATG4B-214ENST00000465399 SEPT8Q92599 483 aa16.39■□□□□ 0.21
ATG4B-214ENST00000465399 RRP36Q96EU6 259 aaKnown RBP16.39■□□□□ 0.21
ATG4B-214ENST00000465399 MAP3K14Q99558 947 aa16.39■□□□□ 0.21
ATG4B-214ENST00000465399 RNPEPQ9H4A4 650 aa16.39■□□□□ 0.21
ATG4B-214ENST00000465399 RTEL1Q9NZ71 1219 aa16.39■□□□□ 0.21
ATG4B-214ENST00000465399 SEC63Q9UGP8 760 aaKnown RBP16.39■□□□□ 0.21
ATG4B-214ENST00000465399 TAF6LQ9Y6J9 622 aa16.39■□□□□ 0.21
ATG4B-214ENST00000465399 SGSM2O43147 1006 aa16.38■□□□□ 0.21
ATG4B-214ENST00000465399 CTSHP09668 335 aa16.38■□□□□ 0.21
ATG4B-214ENST00000465399 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-214ENST00000465399 FBXO22Q8NEZ5 403 aa16.38■□□□□ 0.21
ATG4B-214ENST00000465399 IGDCC4Q8TDY8 1250 aa16.38■□□□□ 0.21
ATG4B-214ENST00000465399 GPR20Q99678 358 aa16.38■□□□□ 0.21
ATG4B-214ENST00000465399 SPZ1Q9BXG8 430 aa16.38■□□□□ 0.21
ATG4B-214ENST00000465399 BCAS3Q9H6U6 928 aa16.38■□□□□ 0.21
ATG4B-214ENST00000465399 COL4A6Q14031 1691 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 DDAH1O94760 285 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 ANTXR2P58335 489 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 HTRA4P83105 476 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-214ENST00000465399 SEMA3FQ13275 785 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 PCNX4Q63HM2 1172 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 XRRA1Q6P2D8 792 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 CASC1Q6TDU7 716 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 NLRX1Q86UT6 975 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 MB21D2Q8IYB1 491 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-214ENST00000465399 ZNF654Q8IZM8 581 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 C17orf80Q9BSJ5 609 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 SETD4Q9NVD3 440 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 RAPGEFL1Q9UHV5 662 aa16.37■□□□□ 0.21
ATG4B-214ENST00000465399 PIK3CDO00329 1044 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 SMARCA1P28370 1054 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 SP4Q02446 784 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 USP17L6PQ6QN14 398 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 TRIM50Q86XT4 487 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 GIMAP8Q8ND71 665 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-214ENST00000465399 SP7Q8TDD2 431 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-214ENST00000465399 APBB2Q92870 758 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 MAP4K1Q92918 833 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 SAMD11Q96NU1 681 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 YME1L1Q96TA2 773 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 SENP7Q9BQF6 1050 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 LZTS2Q9BRK4 669 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 MTA3Q9BTC8 594 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 MYL10Q9BUA6 226 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 UBE2ZQ9H832 354 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-214ENST00000465399 LY9Q9HBG7 655 aa16.36■□□□□ 0.21
ATG4B-214ENST00000465399 RBM8AQ9Y5S9 174 aaKnown RBP16.36■□□□□ 0.21
ATG4B-214ENST00000465399 RBAK-RBAKDNI3L0D1 243 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 UPP2O95045 317 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 GNAQP50148 359 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 ARHGAP4P98171 946 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 PTPROQ16827 1216 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 UTP14CQ5TAP6 766 aaKnown RBP16.35■□□□□ 0.21
ATG4B-214ENST00000465399 NFXL1Q6ZNB6 911 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 LMBR1Q8WVP7 490 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 TOP1MTQ969P6 601 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 CDHR1Q96JP9 859 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 ATG2AQ2TAZ0 1938 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 LOXHD1Q8IVV2 1947 aa16.35■□□□□ 0.21
ATG4B-214ENST00000465399 CCDC69A6NI79 296 aa16.34■□□□□ 0.21
ATG4B-214ENST00000465399 MEIS2O14770 477 aa16.34■□□□□ 0.21
ATG4B-214ENST00000465399 PRC1O43663 620 aa16.34■□□□□ 0.21
ATG4B-214ENST00000465399 MCM5P33992 734 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms