RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RRP36Q96EU6 259 aaKnown RBP26.3■■□□□ 1.8
USP42-205ENST00000465073 MTA3Q9BTC8 594 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 USP26Q9BXU7 913 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 REV3LO60673 3130 aa26.29■■□□□ 1.8
USP42-205ENST00000465073 BDP1A6H8Y1 2624 aa26.29■■□□□ 1.8
USP42-205ENST00000465073 FIBPO43427 364 aa26.29■■□□□ 1.8
USP42-205ENST00000465073 LPXNO60711 386 aa26.29■■□□□ 1.8
USP42-205ENST00000465073 DDAH1O94760 285 aa26.29■■□□□ 1.8
USP42-205ENST00000465073 HOXC8P31273 242 aa26.29■■□□□ 1.8
USP42-205ENST00000465073 SPRED2Q7Z698 418 aa26.29■■□□□ 1.8
USP42-205ENST00000465073 CTCFLQ8NI51 663 aaPredicted RBP26.29■■□□□ 1.8
USP42-205ENST00000465073 CUL5Q93034 780 aa26.29■■□□□ 1.8
USP42-205ENST00000465073 BCAS3Q9H6U6 928 aa26.29■■□□□ 1.8
USP42-205ENST00000465073 LMCD1Q9NZU5 365 aa26.29■■□□□ 1.8
USP42-205ENST00000465073 RBM8AQ9Y5S9 174 aaKnown RBP26.29■■□□□ 1.8
USP42-205ENST00000465073 SMIM10L2AP0DMW4 78 aa26.28■■□□□ 1.8
USP42-205ENST00000465073 SMIM10L2BP0DMW5 78 aa26.28■■□□□ 1.8
USP42-205ENST00000465073 XRRA1Q6P2D8 792 aa26.28■■□□□ 1.8
USP42-205ENST00000465073 ZNF654Q8IZM8 581 aa26.28■■□□□ 1.8
USP42-205ENST00000465073 LZTS2Q9BRK4 669 aa26.28■■□□□ 1.8
USP42-205ENST00000465073 LY9Q9HBG7 655 aa26.28■■□□□ 1.8
USP42-205ENST00000465073 GNAQP50148 359 aa26.27■■□□□ 1.8
USP42-205ENST00000465073 ERVK-21P61565 698 aa26.27■■□□□ 1.8
USP42-205ENST00000465073 CASC1Q6TDU7 716 aa26.27■■□□□ 1.8
USP42-205ENST00000465073 CYFIP1Q7L576 1253 aa26.27■■□□□ 1.8
USP42-205ENST00000465073 TMTC2Q8N394 836 aa26.27■■□□□ 1.8
USP42-205ENST00000465073 SMARCC2Q8TAQ2 1214 aa26.27■■□□□ 1.8
USP42-205ENST00000465073 TGS1Q96RS0 853 aaKnown RBP26.27■■□□□ 1.8
USP42-205ENST00000465073 RTEL1Q9NZ71 1219 aa26.27■■□□□ 1.8
USP42-205ENST00000465073 PIK3CDO00329 1044 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 CAND2O75155 1236 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 GNAT1P11488 350 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 KCNQ1P51787 676 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 SEMA3FQ13275 785 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 PCNX4Q63HM2 1172 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 DBF4BQ8NFT6 615 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 HLA-CQ95604 372 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 GPR20Q99678 358 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 RNPEPQ9H4A4 650 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 SEC63Q9UGP8 760 aaKnown RBP26.26■■□□□ 1.79
USP42-205ENST00000465073 PTPRSQ13332 1948 aa26.26■■□□□ 1.79
USP42-205ENST00000465073 LINC01553A4QN01 128 aa26.25■■□□□ 1.79
USP42-205ENST00000465073 TREHO43280 583 aa26.25■■□□□ 1.79
USP42-205ENST00000465073 AMHP03971 560 aa26.25■■□□□ 1.79
USP42-205ENST00000465073 PLEKHG4Q58EX7 1191 aa26.25■■□□□ 1.79
USP42-205ENST00000465073 USP17L6PQ6QN14 398 aa26.25■■□□□ 1.79
USP42-205ENST00000465073 SENP7Q9BQF6 1050 aa26.25■■□□□ 1.79
USP42-205ENST00000465073 MYL10Q9BUA6 226 aa26.25■■□□□ 1.79
USP42-205ENST00000465073 INSL6Q9Y581 213 aa26.25■■□□□ 1.79
USP42-205ENST00000465073 PRC1O43663 620 aa26.24■■□□□ 1.79
USP42-205ENST00000465073 MKRN4PQ13434 485 aaPredicted RBP26.24■■□□□ 1.79
USP42-205ENST00000465073 FAM117BQ6P1L5 589 aa26.24■■□□□ 1.79
USP42-205ENST00000465073 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.24■■□□□ 1.79
USP42-205ENST00000465073 NECAB3Q96P71 396 aaPredicted RBP26.24■■□□□ 1.79
USP42-205ENST00000465073 SUGCTQ9HAC7 445 aa26.24■■□□□ 1.79
USP42-205ENST00000465073 ZNF215Q9UL58 517 aaPredicted RBP26.24■■□□□ 1.79
USP42-205ENST00000465073 MEIS2O14770 477 aa26.23■■□□□ 1.79
USP42-205ENST00000465073 MCM5P33992 734 aa26.23■■□□□ 1.79
USP42-205ENST00000465073 NFXL1Q6ZNB6 911 aa26.23■■□□□ 1.79
USP42-205ENST00000465073 GDPD5Q8WTR4 605 aa26.23■■□□□ 1.79
USP42-205ENST00000465073 TMEM87BQ96K49 555 aa26.23■■□□□ 1.79
USP42-205ENST00000465073 MTUS1Q9ULD2 1270 aa26.23■■□□□ 1.79
USP42-205ENST00000465073 NLRX1Q86UT6 975 aa26.23■■□□□ 1.79
USP42-205ENST00000465073 GIMAP8Q8ND71 665 aaPredicted RBP26.23■■□□□ 1.79
USP42-205ENST00000465073 SEPT8Q92599 483 aa26.23■■□□□ 1.79
USP42-205ENST00000465073 SETD4Q9NVD3 440 aa26.23■■□□□ 1.79
USP42-205ENST00000465073 XIRP2A4UGR9 3374 aa26.23■■□□□ 1.79
USP42-205ENST00000465073 MYOCDQ8IZQ8 938 aa26.22■■□□□ 1.79
USP42-205ENST00000465073 CCDC69A6NI79 296 aa26.21■■□□□ 1.79
USP42-205ENST00000465073 CALM1P0DP23 149 aa26.21■■□□□ 1.79
USP42-205ENST00000465073 CALM2P0DP24 149 aa26.21■■□□□ 1.79
USP42-205ENST00000465073 CALM3P0DP25 149 aa26.21■■□□□ 1.79
USP42-205ENST00000465073 IRX6P78412 446 aaPredicted RBP26.21■■□□□ 1.79
USP42-205ENST00000465073 TRIM50Q86XT4 487 aa26.21■■□□□ 1.79
USP42-205ENST00000465073 SRBD1Q8N5C6 995 aaKnown RBP26.21■■□□□ 1.79
USP42-205ENST00000465073 PSTPIP2Q9H939 334 aa26.21■■□□□ 1.79
USP42-205ENST00000465073 SH2B2O14492 632 aaPredicted RBP26.2■■□□□ 1.78
USP42-205ENST00000465073 PLEKHA8P1O95397 391 aa26.2■■□□□ 1.78
USP42-205ENST00000465073 COL9A1P20849 921 aa26.2■■□□□ 1.78
USP42-205ENST00000465073 LIFRP42702 1097 aa26.2■■□□□ 1.78
USP42-205ENST00000465073 HTRA4P83105 476 aaPredicted RBP26.2■■□□□ 1.78
USP42-205ENST00000465073 UTP14CQ5TAP6 766 aaKnown RBP26.2■■□□□ 1.78
USP42-205ENST00000465073 LSG1Q9H089 658 aaKnown RBP26.2■■□□□ 1.78
USP42-205ENST00000465073 ADAM17P78536 824 aa26.19■■□□□ 1.78
USP42-205ENST00000465073 SP7Q8TDD2 431 aaPredicted RBP26.19■■□□□ 1.78
USP42-205ENST00000465073 GPRASP2Q96D09 838 aa26.19■■□□□ 1.78
USP42-205ENST00000465073 CDHR1Q96JP9 859 aa26.19■■□□□ 1.78
USP42-205ENST00000465073 TCF20Q9UGU0 1960 aaKnown RBP26.19■■□□□ 1.78
USP42-205ENST00000465073 NRCAMQ92823 1304 aa26.18■■□□□ 1.78
USP42-205ENST00000465073 CTSHP09668 335 aa26.18■■□□□ 1.78
USP42-205ENST00000465073 SP4Q02446 784 aa26.18■■□□□ 1.78
USP42-205ENST00000465073 FAM26DQ5JW98 314 aa26.18■■□□□ 1.78
USP42-205ENST00000465073 FBXO22Q8NEZ5 403 aa26.18■■□□□ 1.78
USP42-205ENST00000465073 LMBR1Q8WVP7 490 aa26.18■■□□□ 1.78
USP42-205ENST00000465073 TELO2Q9Y4R8 837 aa26.18■■□□□ 1.78
USP42-205ENST00000465073 RBAK-RBAKDNI3L0D1 243 aa26.17■■□□□ 1.78
USP42-205ENST00000465073 SLC27A2O14975 620 aa26.17■■□□□ 1.78
USP42-205ENST00000465073 ARHGAP4P98171 946 aa26.17■■□□□ 1.78
USP42-205ENST00000465073 COL4A4P53420 1690 aaPredicted RBP26.17■■□□□ 1.78
USP42-205ENST00000465073 CMTR1Q8N1G2 835 aaKnown RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms