RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 TRIM50Q86XT4 487 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 PLEKHM2Q8IWE5 1019 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 ATP6V0A1Q93050 837 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 AMNQ9BXJ7 453 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 RNPEPQ9H4A4 650 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 PPP4R2Q9NY27 417 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
SND1-203ENST00000463020 DOCK5Q9H7D0 1870 aa18.23■□□□□ 0.51
SND1-203ENST00000463020 C17orf102A2RUQ5 167 aa18.23■□□□□ 0.51
SND1-203ENST00000463020 KLRF2D3W0D1 207 aa18.23■□□□□ 0.51
SND1-203ENST00000463020 COL19A1Q14993 1142 aa18.23■□□□□ 0.51
SND1-203ENST00000463020 ALYREFQ86V81 257 aaKnown RBP18.23■□□□□ 0.51
SND1-203ENST00000463020 TOP1MTQ969P6 601 aa18.23■□□□□ 0.51
SND1-203ENST00000463020 PCDHA1Q9Y5I3 950 aa18.23■□□□□ 0.51
SND1-203ENST00000463020 MYO7AQ13402 2215 aa18.23■□□□□ 0.51
SND1-203ENST00000463020 EMSYQ7Z589 1322 aa18.23■□□□□ 0.51
SND1-203ENST00000463020 COL4A6Q14031 1691 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 PRR33A8MZF0 331 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 H3BNC9 293 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 H3BRB1 525 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 ZBTB5O15062 677 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 CYTH3O43739 400 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 MRPS9P82933 396 aaKnown RBP18.22■□□□□ 0.51
SND1-203ENST00000463020 GPM6BQ13491 265 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 FCHSD1Q86WN1 690 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 TICAM2Q86XR7 235 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 HOMER1Q86YM7 354 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 TMEM192Q8IY95 271 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 BANK1Q8NDB2 785 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 PIGSQ96S52 555 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 TUT1Q9H6E5 874 aaKnown RBP18.22■□□□□ 0.51
SND1-203ENST00000463020 SETD4Q9NVD3 440 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 TAF6LQ9Y6J9 622 aa18.22■□□□□ 0.51
SND1-203ENST00000463020 NLRC5Q86WI3 1866 aa18.21■□□□□ 0.51
SND1-203ENST00000463020 PALM3A6NDB9 673 aaPredicted RBP18.21■□□□□ 0.51
SND1-203ENST00000463020 LTBRP36941 435 aa18.21■□□□□ 0.51
SND1-203ENST00000463020 DLX2Q07687 328 aaPredicted RBP18.21■□□□□ 0.51
SND1-203ENST00000463020 YME1L1Q96TA2 773 aa18.21■□□□□ 0.51
SND1-203ENST00000463020 IGHDP01880 384 aa18.2■□□□□ 0.5
SND1-203ENST00000463020 ZP2Q05996 745 aa18.2■□□□□ 0.5
SND1-203ENST00000463020 CCDC178Q5BJE1 867 aa18.2■□□□□ 0.5
SND1-203ENST00000463020 IFIT1BQ5T764 474 aaKnown RBP18.2■□□□□ 0.5
SND1-203ENST00000463020 RUFY4Q6ZNE9 571 aa18.2■□□□□ 0.5
SND1-203ENST00000463020 UIMC1Q96RL1 719 aa18.2■□□□□ 0.5
SND1-203ENST00000463020 GPR20Q99678 358 aa18.2■□□□□ 0.5
SND1-203ENST00000463020 DSCC1Q9BVC3 393 aa18.2■□□□□ 0.5
SND1-203ENST00000463020 MLXIPQ9HAP2 919 aa18.2■□□□□ 0.5
SND1-203ENST00000463020 POTEB3A0JP26 581 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 CSPG5O95196 566 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 CCND2P30279 289 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 GTF2F1P35269 517 aaKnown RBP eCLIP18.19■□□□□ 0.5
SND1-203ENST00000463020 MFAP1P55081 439 aaKnown RBP18.19■□□□□ 0.5
SND1-203ENST00000463020 IRX6P78412 446 aaPredicted RBP18.19■□□□□ 0.5
SND1-203ENST00000463020 ADAM17P78536 824 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 CLUL1Q15846 466 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 POTEBQ6S5H4 581 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 EP400NLQ6ZTU2 488 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 CYFIP1Q7L576 1253 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 SMC5Q8IY18 1101 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 SEPT8Q92599 483 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 PABPC5Q96DU9 382 aaKnown RBP18.19■□□□□ 0.5
SND1-203ENST00000463020 UBAC1Q9BSL1 405 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 IFIH1Q9BYX4 1025 aaKnown RBP18.19■□□□□ 0.5
SND1-203ENST00000463020 DIAPH3Q9NSV4 1193 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 RTEL1Q9NZ71 1219 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 BAZ2BQ9UIF8 2168 aaKnown RBP18.19■□□□□ 0.5
SND1-203ENST00000463020 FRMPD4Q14CM0 1322 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 USP34Q70CQ2 3546 aa18.19■□□□□ 0.5
SND1-203ENST00000463020 GRM6O15303 877 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 CHRNA1P02708 482 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 GRM4Q14833 912 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 IMMTQ16891 758 aaKnown RBP18.18■□□□□ 0.5
SND1-203ENST00000463020 TIGD5Q53EQ6 642 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 KCNV1Q6PIU1 500 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 LMBR1Q8WVP7 490 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 PIBF1Q8WXW3 757 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 ZBTB10Q96DT7 871 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 OSBPL3Q9H4L5 887 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 NSUN3Q9H649 340 aaKnown RBP18.18■□□□□ 0.5
SND1-203ENST00000463020 RIOX1Q9H6W3 641 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 RC3H2Q9HBD1 1191 aaKnown RBP18.18■□□□□ 0.5
SND1-203ENST00000463020 CLDND1Q9NY35 253 aa18.18■□□□□ 0.5
SND1-203ENST00000463020 C19orf67A6NJJ6 358 aa18.17■□□□□ 0.5
SND1-203ENST00000463020 SPATA31C2B4DYI2 1134 aa18.17■□□□□ 0.5
SND1-203ENST00000463020 GCOM1H8Y6P7 765 aaPredicted RBP18.17■□□□□ 0.5
SND1-203ENST00000463020 POLR2MP0CAP2 368 aa18.17■□□□□ 0.5
SND1-203ENST00000463020 TGFB3P10600 412 aa18.17■□□□□ 0.5
SND1-203ENST00000463020 SP4Q02446 784 aa18.17■□□□□ 0.5
SND1-203ENST00000463020 HYAL1Q12794 435 aa18.17■□□□□ 0.5
SND1-203ENST00000463020 PTPROQ16827 1216 aa18.17■□□□□ 0.5
SND1-203ENST00000463020 UTP14CQ5TAP6 766 aaKnown RBP18.17■□□□□ 0.5
SND1-203ENST00000463020 RPAINQ86UA6 219 aa18.17■□□□□ 0.5
SND1-203ENST00000463020 CHD1LQ86WJ1 897 aa18.17■□□□□ 0.5
SND1-203ENST00000463020 INPP4AQ96PE3 977 aaPredicted RBP18.17■□□□□ 0.5
SND1-203ENST00000463020 KRT23Q9C075 422 aa18.17■□□□□ 0.5
SND1-203ENST00000463020 LINC01565O15544 149 aa18.16■□□□□ 0.5
SND1-203ENST00000463020 DCXO43602 365 aa18.16■□□□□ 0.5
SND1-203ENST00000463020 GHRP10912 638 aa18.16■□□□□ 0.5
SND1-203ENST00000463020 ICAM3P32942 547 aa18.16■□□□□ 0.5
SND1-203ENST00000463020 CTNNB1P35222 781 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms