RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 KDM4AO75164 1064 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 GGPS1O95749 300 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 TGFB3P10600 412 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 MYCLP12524 364 aaPredicted RBP12.63□□□□□ -0.39
CBX3-205ENST00000462165 UBA1P22314 1058 aaKnown RBP12.63□□□□□ -0.39
CBX3-205ENST00000462165 SP2Q02086 613 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 GPM6BQ13491 265 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 PGM5Q15124 567 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 POTEBQ6S5H4 581 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 VSIG10LQ86VR7 867 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 TMEM192Q8IY95 271 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 ENAHQ8N8S7 591 aaPredicted RBP12.63□□□□□ -0.39
CBX3-205ENST00000462165 SEPT8Q92599 483 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 ATP6V0A1Q93050 837 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 YME1L1Q96TA2 773 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 AMNQ9BXJ7 453 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 KCNH6Q9H252 994 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 NSUN3Q9H649 340 aaKnown RBP12.63□□□□□ -0.39
CBX3-205ENST00000462165 VAT1LQ9HCJ6 419 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 FAM50BQ9Y247 325 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
CBX3-205ENST00000462165 B4E1Z4 1266 aa12.62□□□□□ -0.39
CBX3-205ENST00000462165 H3BRB1 525 aa12.62□□□□□ -0.39
CBX3-205ENST00000462165 TREHO43280 583 aa12.62□□□□□ -0.39
CBX3-205ENST00000462165 SORBS3O60504 671 aa12.62□□□□□ -0.39
CBX3-205ENST00000462165 ZP2Q05996 745 aa12.62□□□□□ -0.39
CBX3-205ENST00000462165 TCEAL5Q5H9L2 206 aa12.62□□□□□ -0.39
CBX3-205ENST00000462165 MTMR8Q96EF0 704 aa12.62□□□□□ -0.39
CBX3-205ENST00000462165 UIMC1Q96RL1 719 aa12.62□□□□□ -0.39
CBX3-205ENST00000462165 TUT1Q9H6E5 874 aaKnown RBP12.62□□□□□ -0.39
CBX3-205ENST00000462165 ZSWIM5Q9P217 1185 aa12.62□□□□□ -0.39
CBX3-205ENST00000462165 MYO7AQ13402 2215 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.61□□□□□ -0.39
CBX3-205ENST00000462165 PPP1R11O60927 126 aaPredicted RBP12.61□□□□□ -0.39
CBX3-205ENST00000462165 UPP2O95045 317 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 SMIM10L2AP0DMW4 78 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 SMIM10L2BP0DMW5 78 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 SDSP20132 328 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 IL31RAQ8NI17 732 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 APBB2Q92870 758 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 RILPL2Q969X0 211 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 OSBPL7Q9BZF2 842 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 RNPEPQ9H4A4 650 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 MLXIPQ9HAP2 919 aa12.61□□□□□ -0.39
CBX3-205ENST00000462165 ZNF318Q5VUA4 2279 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 C5orf67F2Z3F1 127 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 ZBTB5O15062 677 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 NCK2O43639 380 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 LGALS2P05162 132 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 CCND2P30279 289 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
CBX3-205ENST00000462165 LTBRP36941 435 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 MRE11P49959 708 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 NHLH1Q02575 133 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 HDAC1Q13547 482 aaPredicted RBP12.6□□□□□ -0.39
CBX3-205ENST00000462165 ADHFE1Q8IWW8 467 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 GPKOWQ92917 476 aaPredicted RBP eCLIP12.6□□□□□ -0.398e-6■■□□□ 13.6
CBX3-205ENST00000462165 IFIH1Q9BYX4 1025 aaKnown RBP12.6□□□□□ -0.39
CBX3-205ENST00000462165 CLDND1Q9NY35 253 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 PCDHA1Q9Y5I3 950 aa12.6□□□□□ -0.39
CBX3-205ENST00000462165 BAZ2BQ9UIF8 2168 aaKnown RBP12.6□□□□□ -0.39
CBX3-205ENST00000462165 USP34Q70CQ2 3546 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 KLRF2D3W0D1 207 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 RB1P06400 928 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 CTSHP09668 335 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 LINC00271P0C7V0 271 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 GNAT1P11488 350 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 ADAM17P78536 824 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 CTC1Q2NKJ3 1217 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 FAM26DQ5JW98 314 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 IFIT1BQ5T764 474 aaKnown RBP12.59□□□□□ -0.39
CBX3-205ENST00000462165 EP400NLQ6ZTU2 488 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 RPAINQ86UA6 219 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 FBXL18Q96ME1 805 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 DSCC1Q9BVC3 393 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 USP26Q9BXU7 913 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
CBX3-205ENST00000462165 KRT23Q9C075 422 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 LMAN2LQ9H0V9 348 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 BCAS3Q9H6U6 928 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 MAD2L2Q9UI95 211 aa12.59□□□□□ -0.39
CBX3-205ENST00000462165 PALM3A6NDB9 673 aaPredicted RBP12.58□□□□□ -0.4
CBX3-205ENST00000462165 GCOM1H8Y6P7 765 aaPredicted RBP12.58□□□□□ -0.4
CBX3-205ENST00000462165 NOP56O00567 594 aaKnown RBP12.58□□□□□ -0.4
CBX3-205ENST00000462165 POLR2MP0CAP2 368 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 ICAM3P32942 547 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 IRS1P35568 1242 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 TTC3P53804 2025 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 TRAF1Q13077 416 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 NEDD9Q14511 834 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 SEC23AQ15436 765 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 SMAD2Q15796 467 aaKnown RBP12.58□□□□□ -0.4
CBX3-205ENST00000462165 IMMTQ16891 758 aaKnown RBP12.58□□□□□ -0.4
CBX3-205ENST00000462165 CWC27Q6UX04 472 aaKnown RBP12.58□□□□□ -0.4
CBX3-205ENST00000462165 METTL7BQ6UX53 244 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 FIBCD1Q8N539 461 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 IL17RAQ96F46 866 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms