RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 SPATA5Q8NB90 893 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 SLC17A8Q8NDX2 589 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 ANKZF1Q9H8Y5 726 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 MYO1AQ9UBC5 1043 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 PALD1Q9ULE6 856 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 TPX2Q9ULW0 747 aaKnown RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 TRPC6Q9Y210 931 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 PLIN4Q96Q06 1357 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 PLXNA1Q9UIW2 1896 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 TNKSO95271 1327 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 VPS37CA5D8V6 355 aaPredicted RBP6.52□□□□□ -1.37
CLK1-207ENST00000461981 SMAPO00193 183 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 ZSCAN12O43309 604 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 RASSF9O75901 435 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 RFC2P35250 354 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 USP5P45974 858 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 SMTNP53814 917 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 CHMP4BP1P59074 171 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 ZNF697Q5TEC3 545 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 FAM173BQ6P4H8 233 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 CYB5D1Q6P9G0 228 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 ANKRD33Q7Z3H0 272 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 SSH3Q8TE77 659 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 ALS2CR12Q96Q35 445 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 SPAG5Q96R06 1193 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 LBHD1Q9BQE6 289 aaPredicted RBP6.52□□□□□ -1.37
CLK1-207ENST00000461981 BATF3Q9NR55 127 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 KCND1Q9NSA2 647 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 TBC1D7Q9P0N9 293 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 ZBTB21Q9ULJ3 1066 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 NUB1Q9Y5A7 615 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 OPLAHO14841 1288 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 SMNDC1O75940 238 aaKnown RBP eCLIP6.52□□□□□ -1.37
CLK1-207ENST00000461981 GNAI2P04899 355 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 VSNL1P62760 191 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 RASGRF1Q13972 1273 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 FAM114A1Q8IWE2 563 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 OTUD7AQ8TE49 926 aaPredicted RBP6.52□□□□□ -1.37
CLK1-207ENST00000461981 STAMBPL1Q96FJ0 436 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 OSBPL9Q96SU4 736 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 GORASP1Q9BQQ3 440 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 UNC45AQ9H3U1 944 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 SPATA7Q9P0W8 599 aa6.52□□□□□ -1.37
CLK1-207ENST00000461981 F6X3S4 739 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 WDR46O15213 610 aaKnown RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 SEPT4O43236 478 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 CNMDO75829 334 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 PARNO95453 639 aaKnown RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 SYF2O95926 243 aaKnown RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 SDSP20132 328 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 ARHGAP25P42331 645 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 ROR2Q01974 943 aaKnown RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 PTPN11Q06124 597 aaPredicted RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 RAB30Q15771 203 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 TTC22Q5TAA0 569 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 GPR142Q7Z601 462 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 PLEKHM2Q8IWE5 1019 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 SDR16C5Q8N3Y7 309 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 FAM76AQ8TAV0 307 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 ATXN2LQ8WWM7 1075 aaKnown RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 SSH1Q8WYL5 1049 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 EDC3Q96F86 508 aaKnown RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 DEFB118Q96PH6 123 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 UBE2OQ9C0C9 1292 aaKnown RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 GBP3Q9H0R5 595 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 MTIF3Q9H2K0 278 aaKnown RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 VCPKMTQ9H867 229 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 AATFQ9NY61 560 aaKnown RBP eCLIP6.51□□□□□ -1.37
CLK1-207ENST00000461981 HMG20BQ9P0W2 317 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 ATP6V1DQ9Y5K8 247 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 KBTBD13C9JR72 458 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 OPA1O60313 960 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 PRPF6O94906 941 aaKnown RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 PHKA1P46020 1223 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 GABPAQ06546 454 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 NFIAQ12857 509 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 MAMDC4Q6UXC1 1216 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 FERMT3Q86UX7 667 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 ELOA2Q8IYF1 753 aaPredicted RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 TRIM58Q8NG06 486 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 HNRNPLLQ8WVV9 542 aaKnown RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 CUL5Q93034 780 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 FAM167BQ9BTA0 163 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 CAPS2Q9BXY5 557 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 TRIM7Q9C029 511 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 LRRCC1Q9C099 1032 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 POLD4Q9HCU8 107 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 HAUS2Q9NVX0 235 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 IQSEC3Q9UPP2 1182 aaPredicted RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 PFASO15067 1338 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 DDTLA6NHG4 134 aaPredicted RBP6.51□□□□□ -1.37
CLK1-207ENST00000461981 EIF3HO15372 352 aaKnown RBP eCLIP6.51□□□□□ -1.37
CLK1-207ENST00000461981 ATP2C2O75185 946 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 LINGO3P0C6S8 592 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 FUT4P22083 530 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 CNGA1P29973 690 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 PRDX5P30044 214 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 GOLGA8FQ08AF8 430 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 GOLGA8DPQ0D2H9 430 aa6.51□□□□□ -1.37
CLK1-207ENST00000461981 PPIGQ13427 754 aaKnown RBP eCLIP6.51□□□□□ -1.371e-9■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms