RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 EMSYQ7Z589 1322 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 AMHP03971 560 aa14.28□□□□□ -0.12
GPNMB-204ENST00000459927 CYP21A2P08686 494 aa14.28□□□□□ -0.12
GPNMB-204ENST00000459927 PTH1RQ03431 593 aa14.28□□□□□ -0.12
GPNMB-204ENST00000459927 KHSRPQ92945 711 aaKnown RBP eCLIP14.28□□□□□ -0.12
GPNMB-204ENST00000459927 TOP1MTQ969P6 601 aa14.28□□□□□ -0.12
GPNMB-204ENST00000459927 C17orf80Q9BSJ5 609 aa14.28□□□□□ -0.12
GPNMB-204ENST00000459927 CD320Q9NPF0 282 aa14.28□□□□□ -0.12
GPNMB-204ENST00000459927 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
GPNMB-204ENST00000459927 STAM2O75886 525 aa14.27□□□□□ -0.13
GPNMB-204ENST00000459927 LGALS2P05162 132 aa14.27□□□□□ -0.13
GPNMB-204ENST00000459927 SMIM10L2AP0DMW4 78 aa14.27□□□□□ -0.13
GPNMB-204ENST00000459927 SMIM10L2BP0DMW5 78 aa14.27□□□□□ -0.13
GPNMB-204ENST00000459927 NEDD9Q14511 834 aa14.27□□□□□ -0.13
GPNMB-204ENST00000459927 CYFIP1Q7L576 1253 aa14.27□□□□□ -0.13
GPNMB-204ENST00000459927 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.27□□□□□ -0.13
GPNMB-204ENST00000459927 SP7Q8TDD2 431 aaPredicted RBP14.27□□□□□ -0.13
GPNMB-204ENST00000459927 IGDCC4Q8TDY8 1250 aa14.27□□□□□ -0.13
GPNMB-204ENST00000459927 SETD4Q9NVD3 440 aa14.27□□□□□ -0.13
GPNMB-204ENST00000459927 ERICH2A1L162 156 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 E7EWF7 191 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 PI4K2BG5E9Z4 385 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 GPR37L1O60883 481 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 GNAT1P11488 350 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 PDE4AP27815 886 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 PLA2G5P39877 138 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 ADAM17P78536 824 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 SEMA3FQ13275 785 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 WTAPQ15007 396 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 GNPTABQ3T906 1256 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 LEXMQ3ZCV2 418 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 METTL7BQ6UX53 244 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 FBXO22Q8NEZ5 403 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 NCOA7Q8NI08 942 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 SEPT8Q92599 483 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 FAM122AQ96E09 287 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 INPP4AQ96PE3 977 aaPredicted RBP14.26□□□□□ -0.13
GPNMB-204ENST00000459927 GPR20Q99678 358 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 UBE2ZQ9H832 354 aaPredicted RBP14.26□□□□□ -0.13
GPNMB-204ENST00000459927 TELO2Q9Y4R8 837 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 ARIH1Q9Y4X5 557 aaPredicted RBP14.26□□□□□ -0.13
GPNMB-204ENST00000459927 BRWD1Q9NSI6 2320 aa14.26□□□□□ -0.13
GPNMB-204ENST00000459927 LAMA4Q16363 1823 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.25□□□□□ -0.13
GPNMB-204ENST00000459927 NOP56O00567 594 aaKnown RBP14.25□□□□□ -0.13
GPNMB-204ENST00000459927 UPP2O95045 317 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 CHMLP26374 656 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 SMARCA1P28370 1054 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 EPC2Q52LR7 807 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 FAM26DQ5JW98 314 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 TMEM31Q5JXX7 168 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 FAM178BQ8IXR5 827 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 RUFY2Q8WXA3 655 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 SAMD11Q96NU1 681 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 SENP7Q9BQF6 1050 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 TAF6LQ9Y6J9 622 aa14.25□□□□□ -0.13
GPNMB-204ENST00000459927 H3BNC9 293 aa14.24□□□□□ -0.13
GPNMB-204ENST00000459927 FIBPO43427 364 aa14.24□□□□□ -0.13
GPNMB-204ENST00000459927 CAND2O75155 1236 aa14.24□□□□□ -0.13
GPNMB-204ENST00000459927 GSPT1P15170 499 aaKnown RBP14.24□□□□□ -0.13
GPNMB-204ENST00000459927 USP17L6PQ6QN14 398 aa14.24□□□□□ -0.13
GPNMB-204ENST00000459927 CATIPQ7Z7H3 387 aa14.24□□□□□ -0.13
GPNMB-204ENST00000459927 TMEM192Q8IY95 271 aa14.24□□□□□ -0.13
GPNMB-204ENST00000459927 PIBF1Q8WXW3 757 aa14.24□□□□□ -0.13
GPNMB-204ENST00000459927 MRPL38Q96DV4 380 aaKnown RBP14.24□□□□□ -0.13
GPNMB-204ENST00000459927 MAP3K14Q99558 947 aa14.24□□□□□ -0.13
GPNMB-204ENST00000459927 C11orf16Q9NQ32 467 aa14.24□□□□□ -0.13
GPNMB-204ENST00000459927 FRMPD4Q14CM0 1322 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 GRXCR2A6NFK2 248 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 MEIS2O14770 477 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 CHRNA1P02708 482 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 KCNA5P22460 613 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 ANTXR2P58335 489 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 GPM6BQ13491 265 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 SART3Q15020 963 aaKnown RBP14.23□□□□□ -0.13
GPNMB-204ENST00000459927 PTPROQ16827 1216 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 UTP14CQ5TAP6 766 aaKnown RBP14.23□□□□□ -0.13
GPNMB-204ENST00000459927 PCNX4Q63HM2 1172 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 XRRA1Q6P2D8 792 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 RALYLQ86SE5 291 aaKnown RBP14.23□□□□□ -0.13
GPNMB-204ENST00000459927 GJD3Q8N144 294 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 NEK9Q8TD19 979 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 MAP4K1Q92918 833 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 YME1L1Q96TA2 773 aa14.23□□□□□ -0.13
GPNMB-204ENST00000459927 MICAL3Q7RTP6 2002 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 KAT6AQ92794 2004 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 NRCAMQ92823 1304 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 PIK3CDO00329 1044 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 ENPP3O14638 875 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 ATP9AO75110 1047 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 CTSHP09668 335 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 RPAINQ86UA6 219 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 NLRX1Q86UT6 975 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 GIMAP8Q8ND71 665 aaPredicted RBP14.22□□□□□ -0.13
GPNMB-204ENST00000459927 BANK1Q8NDB2 785 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 SMARCC2Q8TAQ2 1214 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 APBB2Q92870 758 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 CUL5Q93034 780 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms