RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 TOB2Q14106 344 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-203ENST00000459756 CAGE1Q8TC20 777 aa18.45■□□□□ 0.54
COL7A1-203ENST00000459756 CCDC12Q8WUD4 166 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-203ENST00000459756 HERVK_113Q902F9 699 aa18.45■□□□□ 0.54
COL7A1-203ENST00000459756 SCLYQ96I15 445 aa18.45■□□□□ 0.54
COL7A1-203ENST00000459756 GPR20Q99678 358 aa18.45■□□□□ 0.54
COL7A1-203ENST00000459756 JADE2Q9NQC1 790 aa18.45■□□□□ 0.54
COL7A1-203ENST00000459756 MTMR10Q9NXD2 777 aa18.45■□□□□ 0.54
COL7A1-203ENST00000459756 DOCK5Q9H7D0 1870 aa18.44■□□□□ 0.54
COL7A1-203ENST00000459756 ESYT2A0FGR8 921 aa18.44■□□□□ 0.54
COL7A1-203ENST00000459756 H3BRB1 525 aa18.44■□□□□ 0.54
COL7A1-203ENST00000459756 EIF5BO60841 1220 aaKnown RBP18.44■□□□□ 0.54
COL7A1-203ENST00000459756 LGALS2P05162 132 aa18.44■□□□□ 0.54
COL7A1-203ENST00000459756 IFNAR1P17181 557 aa18.44■□□□□ 0.54
COL7A1-203ENST00000459756 NTRK3Q16288 839 aa18.44■□□□□ 0.54
COL7A1-203ENST00000459756 ZNF697Q5TEC3 545 aa18.44■□□□□ 0.54
COL7A1-203ENST00000459756 CTAGE1Q96RT6 745 aa18.44■□□□□ 0.54
COL7A1-203ENST00000459756 RNF26Q9BY78 433 aaPredicted RBP18.44■□□□□ 0.54
COL7A1-203ENST00000459756 UPF3BQ9BZI7 483 aaKnown RBP18.44■□□□□ 0.54
COL7A1-203ENST00000459756 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
COL7A1-203ENST00000459756 IQCF3P0C7M6 154 aa18.43■□□□□ 0.54
COL7A1-203ENST00000459756 KCNA2P16389 499 aa18.43■□□□□ 0.54
COL7A1-203ENST00000459756 CLK2P49760 499 aaKnown RBP18.43■□□□□ 0.54
COL7A1-203ENST00000459756 CCT2P78371 535 aaKnown RBP18.43■□□□□ 0.54
COL7A1-203ENST00000459756 PKN1Q16512 942 aa18.43■□□□□ 0.54
COL7A1-203ENST00000459756 MCTP2Q6DN12 878 aa18.43■□□□□ 0.54
COL7A1-203ENST00000459756 AFAP1L1Q8TED9 768 aa18.43■□□□□ 0.54
COL7A1-203ENST00000459756 PHKBQ93100 1093 aa18.43■□□□□ 0.54
COL7A1-203ENST00000459756 ZNF274Q96GC6 653 aaPredicted RBP18.43■□□□□ 0.54
COL7A1-203ENST00000459756 ANO3Q9BYT9 981 aa18.43■□□□□ 0.54
COL7A1-203ENST00000459756 ZMYND12Q9H0C1 365 aa18.43■□□□□ 0.54
COL7A1-203ENST00000459756 C6orf50Q9HD87 102 aa18.43■□□□□ 0.54
COL7A1-203ENST00000459756 TANC1Q9C0D5 1861 aa18.43■□□□□ 0.54
COL7A1-203ENST00000459756 COL6A3P12111 3177 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 ATP9AO75110 1047 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 SREBF1P36956 1147 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 ANAPC15P60006 121 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 RBL2Q08999 1139 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 PTK7Q13308 1070 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 VWCEQ96DN2 955 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 MXRA8Q9BRK3 442 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 SLC26A6Q9BXS9 759 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 NCOA5Q9HCD5 579 aaKnown RBP18.42■□□□□ 0.54
COL7A1-203ENST00000459756 PDRG1Q9NUG6 133 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 TMEM260Q9NX78 707 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 ZNF215Q9UL58 517 aaPredicted RBP18.42■□□□□ 0.54
COL7A1-203ENST00000459756 GTF3C3Q9Y5Q9 886 aa18.42■□□□□ 0.54
COL7A1-203ENST00000459756 TMEM265A0A087WTH1 108 aa18.41■□□□□ 0.54
COL7A1-203ENST00000459756 SELPP16109 830 aa18.41■□□□□ 0.54
COL7A1-203ENST00000459756 GNA11P29992 359 aa18.41■□□□□ 0.54
COL7A1-203ENST00000459756 SP4Q02446 784 aa18.41■□□□□ 0.54
COL7A1-203ENST00000459756 CEP55Q53EZ4 464 aa18.41■□□□□ 0.54
COL7A1-203ENST00000459756 OTOP2Q7RTS6 562 aa18.41■□□□□ 0.54
COL7A1-203ENST00000459756 DEFB128Q7Z7B8 93 aa18.41■□□□□ 0.54
COL7A1-203ENST00000459756 TRIM22Q8IYM9 498 aa18.41■□□□□ 0.54
COL7A1-203ENST00000459756 DHX38Q92620 1227 aaKnown RBP18.41■□□□□ 0.54
COL7A1-203ENST00000459756 PGBD1Q96JS3 809 aa18.41■□□□□ 0.54
COL7A1-203ENST00000459756 KCNH7Q9NS40 1196 aa18.41■□□□□ 0.54
COL7A1-203ENST00000459756 CXXC1Q9P0U4 656 aaPredicted RBP18.41■□□□□ 0.54
COL7A1-203ENST00000459756 TRIP12Q14669 1992 aaPredicted RBP18.41■□□□□ 0.54
COL7A1-203ENST00000459756 SCN5AQ14524 2016 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 PARNO95453 639 aaKnown RBP18.4■□□□□ 0.54
COL7A1-203ENST00000459756 SMIM10L2AP0DMW4 78 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 SMIM10L2BP0DMW5 78 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 ACTN1P12814 892 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 HOXC8P31273 242 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 ARHGAP4P98171 946 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 REXO1Q8N1G1 1221 aaKnown RBP18.4■□□□□ 0.54
COL7A1-203ENST00000459756 CCDC148Q8NFR7 591 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 BICD2Q8TD16 824 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 SEPT1Q8WYJ6 367 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 SEMA6BQ9H3T3 888 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 STXBP5LQ9Y2K9 1186 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 TELO2Q9Y4R8 837 aa18.4■□□□□ 0.54
COL7A1-203ENST00000459756 C17orf102A2RUQ5 167 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 CPLX1O14810 134 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 CKBP12277 381 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 DNAJB2P25686 324 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 TCF7P36402 384 aaPredicted RBP18.39■□□□□ 0.53
COL7A1-203ENST00000459756 ZNF200P98182 395 aaPredicted RBP18.39■□□□□ 0.53
COL7A1-203ENST00000459756 HIC1Q14526 733 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 UTP14CQ5TAP6 766 aaKnown RBP18.39■□□□□ 0.53
COL7A1-203ENST00000459756 JAKMIP3Q5VZ66 844 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 CPLX2Q6PUV4 134 aaKnown RBP18.39■□□□□ 0.53
COL7A1-203ENST00000459756 LRRC8DQ7L1W4 858 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 NIPA1Q7RTP0 329 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 SERINC5Q86VE9 423 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 TRIM50Q86XT4 487 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 CYP2W1Q8TAV3 490 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 ATP6V0A1Q93050 837 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 FAM161BQ96MY7 647 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 JPH1Q9HDC5 661 aaPredicted RBP18.39■□□□□ 0.53
COL7A1-203ENST00000459756 SH3GLB2Q9NR46 395 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 PKD2L1Q9P0L9 805 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 SLC4A7Q9Y6M7 1214 aa18.39■□□□□ 0.53
COL7A1-203ENST00000459756 GSTTP1A0A1W2PQM5 241 aa18.38■□□□□ 0.53
COL7A1-203ENST00000459756 MEIS1O00470 390 aa18.38■□□□□ 0.53
COL7A1-203ENST00000459756 PPFIA3O75145 1194 aa18.38■□□□□ 0.53
COL7A1-203ENST00000459756 GNAT1P11488 350 aa18.38■□□□□ 0.53
COL7A1-203ENST00000459756 ZNF76P36508 570 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms