RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 GRM4Q14833 912 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 COL19A1Q14993 1142 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 GNPTABQ3T906 1256 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 FAM117BQ6P1L5 589 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 METTL7BQ6UX53 244 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 CYB5R4Q7L1T6 521 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 FAM178BQ8IXR5 827 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 MYOCDQ8IZQ8 938 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 GPKOWQ92917 476 aaPredicted RBP eCLIP12.09□□□□□ -0.47
HDLBP-227ENST00000458564 ATP6V0A1Q93050 837 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 MRPL38Q96DV4 380 aaKnown RBP12.09□□□□□ -0.47
HDLBP-227ENST00000458564 C17orf80Q9BSJ5 609 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 USP26Q9BXU7 913 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 IL25Q9H293 177 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 MLXIPQ9HAP2 919 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 CD320Q9NPF0 282 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 MYH7BA7E2Y1 1941 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 PNMA6FA0A0J9YX94 578 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 CYTH3O43739 400 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 IGHDP01880 384 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 KCNA5P22460 613 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 TROAPQ12815 778 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 NEDD9Q14511 834 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 PTPROQ16827 1216 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 TIGD5Q53EQ6 642 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 HOMER1Q86YM7 354 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-227ENST00000458564 NEK9Q8TD19 979 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 SEPT8Q92599 483 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 TOP1MTQ969P6 601 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 PIGSQ96S52 555 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 RNPEPQ9H4A4 650 aa12.08□□□□□ -0.48
HDLBP-227ENST00000458564 MUC6Q6W4X9 2439 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-227ENST00000458564 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 H3BNC9 293 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 NOP56O00567 594 aaKnown RBP12.07□□□□□ -0.48
HDLBP-227ENST00000458564 TREHO43280 583 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 FIBPO43427 364 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 SORBS3O60504 671 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 GNAT1P11488 350 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 ADAM17P78536 824 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 MRPS9P82933 396 aaKnown RBP12.07□□□□□ -0.48
HDLBP-227ENST00000458564 TRDNQ13061 729 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 SEMA3FQ13275 785 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 PUS10Q3MIT2 529 aaKnown RBP12.07□□□□□ -0.48
HDLBP-227ENST00000458564 EPC2Q52LR7 807 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 FCHSD1Q86WN1 690 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 GJD3Q8N144 294 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 APBB2Q92870 758 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 YME1L1Q96TA2 773 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 GPR20Q99678 358 aa12.07□□□□□ -0.48
HDLBP-227ENST00000458564 GRXCR2A6NFK2 248 aa12.06□□□□□ -0.48
HDLBP-227ENST00000458564 FAM26DQ5JW98 314 aa12.06□□□□□ -0.48
HDLBP-227ENST00000458564 PTCRAQ6ISU1 281 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-227ENST00000458564 RPAINQ86UA6 219 aa12.06□□□□□ -0.48
HDLBP-227ENST00000458564 SENP7Q9BQF6 1050 aa12.06□□□□□ -0.48
HDLBP-227ENST00000458564 BCAS3Q9H6U6 928 aa12.06□□□□□ -0.48
HDLBP-227ENST00000458564 ZNF215Q9UL58 517 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-227ENST00000458564 U3KPZ7 1027 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-227ENST00000458564 ERICH2A1L162 156 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 PRR33A8MZF0 331 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 C5orf67F2Z3F1 127 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 RBAK-RBAKDNI3L0D1 243 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 PIK3CDO00329 1044 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
HDLBP-227ENST00000458564 CYP21A2P08686 494 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 CTSHP09668 335 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 IL9P15248 144 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 SART3Q15020 963 aaKnown RBP12.05□□□□□ -0.48
HDLBP-227ENST00000458564 PCNX4Q63HM2 1172 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 XRRA1Q6P2D8 792 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 CYFIP1Q7L576 1253 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 TRIM50Q86XT4 487 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 TMEM192Q8IY95 271 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 BANK1Q8NDB2 785 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 LMBR1Q8WVP7 490 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 PABPC5Q96DU9 382 aaKnown RBP12.05□□□□□ -0.48
HDLBP-227ENST00000458564 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
HDLBP-227ENST00000458564 MAP3K14Q99558 947 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 IFIH1Q9BYX4 1025 aaKnown RBP12.05□□□□□ -0.48
HDLBP-227ENST00000458564 OSBPL7Q9BZF2 842 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 SENP2Q9HC62 589 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 SETD4Q9NVD3 440 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 NRCAMQ92823 1304 aa12.05□□□□□ -0.48
HDLBP-227ENST00000458564 BAZ2BQ9UIF8 2168 aaKnown RBP12.04□□□□□ -0.48
HDLBP-227ENST00000458564 FAM86C2PA6NEL3 165 aa12.04□□□□□ -0.48
HDLBP-227ENST00000458564 LINC00271P0C7V0 271 aa12.04□□□□□ -0.48
HDLBP-227ENST00000458564 GSPT1P15170 499 aaKnown RBP12.04□□□□□ -0.48
HDLBP-227ENST00000458564 GPM6BQ13491 265 aa12.04□□□□□ -0.48
HDLBP-227ENST00000458564 WTAPQ15007 396 aa12.04□□□□□ -0.48
HDLBP-227ENST00000458564 TAF2Q6P1X5 1199 aa12.04□□□□□ -0.48
HDLBP-227ENST00000458564 RALYLQ86SE5 291 aaKnown RBP12.04□□□□□ -0.48
HDLBP-227ENST00000458564 SPZ1Q9BXG8 430 aa12.04□□□□□ -0.48
HDLBP-227ENST00000458564 NSUN3Q9H649 340 aaKnown RBP12.04□□□□□ -0.48
HDLBP-227ENST00000458564 EHMT1Q9H9B1 1298 aa12.04□□□□□ -0.48
HDLBP-227ENST00000458564 RC3H2Q9HBD1 1191 aaKnown RBP12.04□□□□□ -0.48
HDLBP-227ENST00000458564 RALGAPA2Q2PPJ7 1873 aa12.04□□□□□ -0.48
HDLBP-227ENST00000458564 NCK2O43639 380 aa12.03□□□□□ -0.48
HDLBP-227ENST00000458564 ALADP13716 330 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms